CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J28923
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.J28923
T298999_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J28923.1.p
NAC/NAM
5
141
PPGVHFRPDDDEFVEFYLRPHASGEPASFPAGVVVVDDDAAGCTLPWELLDRHGRGADDEAYFLVRSSGDGDGQEKRGAHQERGCGGGGTWKSQKRLAHGGSRVDDAGEKVHWSLHNLNLHMGRGESGGSVGWALTD
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa01831
Panicum virgatum
Pavir.Aa01831
N
0.943
Pavir.Ab01268
Panicum virgatum
Pavir.Ab01268
N
0.957
Pavir.J38077
Panicum virgatum
Pavir.J38077
N
0.996