CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10024980m.g
(
Eutrema salsugineum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Thhalv10024980m.g
T299300_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.994
0.974
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.994
0.965
NAC010
M07167_2.00
Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN
Dap-seq
OMalley et al.(2016)
SND3_colamp_a
0.972
0.746
NAC010
M07168_2.00
Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND3_col_b
0.972
0.746
NAC073
M07221_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
SND2_col_a
0.949
0.728
NAC073
M07222_2.00
Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND2_colamp_a
0.949
0.728
PK11990.1
M01290_2.00
Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH
PBM
Lambert et al.(2019)
pTH11336
0.928
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10024980m
NAC/NAM
49
196
PAGVKFDPTDQELIEHLEAKVLVKDIKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTESDNNIQGSSSSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHL
Links
Other
NAC/NAM
family TFs
Other
Eutrema salsugineum
TFs
352 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
21800_YPL128C
Saccharomyces mikatae
21800_YPL128C
I
22419_YPL128C
Saccharomyces paradoxus
22419_YPL128C
I
25381_YPL128C
Saccharomyces bayanus
25381_YPL128C
I
AACERI_AaceriACR096W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriACR096W
I
AGOS_ACR096W
Ashbya gossypii
AGOS_ACR096W
I
BN7_5968
Wickerhamomyces ciferrii
BN7_5968
I
CANTEDRAFT_127045
Candida tenuis
CANTEDRAFT_127045
I
CaO19.801
Candida albicans
CaO19.801
I
CaO19.8420
Candida albicans
CaO19.8420
I
CD36_18830
Candida dubliniensis
CD36_18830
I
CLUG_01092
Clavispora lusitaniae
CLUG_01092
I
CLUG_01092
Candida lusitaniae
CLUG_01092
I
CORT_0A10400
Candida orthopsilosis
CORT_0A10400
I
CPAG_00784
Candida parapsilosis
CPAG_00784
I
CTRG_01572
Candida tropicalis
CTRG_01572
I
DEHA2C16346g
Debaryomyces hansenii
DEHA2C16346g
I
Ecym_8316
Eremothecium cymbalariae
Ecym_8316
I
e_gwh1.5.1.153.1
Pichia stipitis
e_gwh1.5.1.153.1
I
G210_0538
Candida maltosa
G210_0538
I
GNLVRS01_PISO0L21659g
Millerozyma farinosa
GNLVRS01_PISO0L21659g
I
KLTH0D10164g
Lachancea thermotolerans
KLTH0D10164g
I
KLTH0D10164g
Kluyveromyces thermotolerans
KLTH0D10164g
I
Kpol_530p11
Vanderwaltozyma polyspora
Kpol_530p11
I
Kwal_8619
Kluyveromyces waltii
Kwal_8619
I
LALA0_S10e01860g
Lachancea lanzarotensis
LALA0_S10e01860g
I
LELG_01028
Lodderomyces elongisporus
LELG_01028
I
orf19.801
Candida albicans
orf19.801
D
PAS_chr1-4_0281
Komagataella pastoris
PAS_chr1-4_0281
I
PGUG_03851
Meyerozyma guilliermondii
PGUG_03851
I
PGUG_03851
Candida guilliermondii
PGUG_03851
I
PICST_47348
Scheffersomyces stipitis
PICST_47348
I
SAKL0H07678g
Lachancea kluyveri
SAKL0H07678g
I
SKUD_201904
Saccharomyces kudriavzevii
SKUD_201904
I
SPAPADRAFT_55275
Spathaspora passalidarum
SPAPADRAFT_55275
I
SU7_3534
Saccharomyces arboricola
SU7_3534
I
TBF1
Saccharomyces cerevisiae
YPL128C
D
TBLA_0B04080
Tetrapisispora blattae
TBLA_0B04080
I
XP_002490398.1
Pichia pastoris
XP_002490398.1
I
ZBAI_00516
Zygosaccharomyces bailii
ZBAI_00516
I
ZBAI_05815
Zygosaccharomyces bailii
ZBAI_05815
I
ZYRO0F06292g
Zygosaccharomyces rouxii
ZYRO0F06292g
I