CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_kg.C_scaffold_15000017
(
Cryphonectria parasitica
)
Ndt80/PhoG
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05224 (NDT80_PhoG)
IPR007888
fgenesh1_kg.C_scaffold_15000017
T300254_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_kg.C_scaffold_15000017
Ndt80/PhoG
19
177
ELTCYRRNLWQCSGQITLPRHISHIIDEQGQQLPVFELAASISAVESIEGKPTEIISIPWKSSNGEDTKSPAAPPNIPLDLSAGQELDHNRIALPVSWKRLQFKHATANNGRRKGLQQHYVVQINLLSKLKNGQFIKIAEIQSGPVIVRGRSPRNFDSR
Links
Other
Ndt80/PhoG
family TFs
Other
Cryphonectria parasitica
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA029546
Oryza indica
BGIOSGA029546
N
0.000
BRADI4G33740
Brachypodium distachyon
BRADI4G33740
N
0.000
GRMZM2G006578
Zea mays
GRMZM2G006578
N
0.000
GRMZM2G060290
Zea mays
GRMZM2G060290
N
0.000
GRMZM2G125934
Zea mays
GRMZM2G125934
N
0.000
LPERR09G10860
Leersia perrieri
LPERR09G10860
N
0.000
MLOC_68986
Hordeum vulgare
MLOC_68986
N
0.000
OB09G21260
Oryza brachyantha
OB09G21260
N
0.000
OBART09G14730
Oryza barthii
OBART09G14730
N
0.000
OGLUM09G15360
Oryza glumaepatula
OGLUM09G15360
N
0.000
OMERI09G11450
Oryza meridionalis
OMERI09G11450
N
0.000
ONIVA08G17430
Oryza nivara
ONIVA08G17430
N
0.000
OPUNC09G13200
Oryza punctata
OPUNC09G13200
N
0.000
ORGLA09G0113500
Oryza glaberrima
ORGLA09G0113500
N
0.000
ORUFI09G15880
Oryza rufipogon
ORUFI09G15880
N
0.000
OS09G0489500
Oryza sativa
OS09G0489500
N
0.000
Pavir.Ba01723
Panicum virgatum
Pavir.Ba01723
N
0.000
Pavir.Db00756
Panicum virgatum
Pavir.Db00756
N
0.000
Pavir.J32240
Panicum virgatum
Pavir.J32240
N
0.000
PGSC0003DMG400011430
Solanum tuberosum
PGSC0003DMG400011430
I
0.000
Sb02g028380
Sorghum bicolor
Sb02g028380
N
0.000
Sb10g024190
Sorghum bicolor
Sb10g024190
N
0.000
Si006417m.g
Setaria italica
Si006417m.g
N
0.000
Si029606m.g
Setaria italica
Si029606m.g
N
0.000
Solyc10g078670.1
Solanum lycopersicum
Solyc10g078670.1
I
0.000
Traes_5AL_39649C38E
Triticum aestivum
Traes_5AL_39649C38E
N
0.000
Traes_5BL_C08428870
Triticum aestivum
Traes_5BL_C08428870
N
0.000
Traes_5DL_1950C1FC2
Triticum aestivum
Traes_5DL_1950C1FC2
N
0.000