CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM15949
(
Drosophila sechellia
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
FBgn0170865
T300591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
stc
M03922_2.00
Drosophila melanogaster
YATYACMWKGTRATA
TATYACMWKGTRATR
SELEX
Nitta et al.(2015)
stc_1
0.962
0.962
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0197426
NFX
461
478
CSHACTLLCHPGPCPPCQ
FBpp0197426
NFX
514
532
CGEHRCQAECHSGKCEPCH
FBpp0197426
NFX
572
590
CGHHKCKDSCHAGSCRPCK
FBpp0197426
NFX
631
653
CGKPAHPHQCGSKCHLGQCPPCP
FBpp0197426
NFX
720
738
CGKHKCDQPCHRGNCPPCY
FBpp0197426
NFX
831
856
CGGHKCIKPCHEGPCQSAAEICRQSC
FBpp0197426
NFX
863
882
CGHKCAAPCHEGGCPETPCK
Links
Other
NFX
family TFs
Other
Drosophila sechellia
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA17585
Drosophila pseudoobscura
FBgn0077596
I
0.893
GD23996
Drosophila simulans
FBgn0195356
I
0.992
GE20891
Drosophila yakuba
FBgn0238180
I
0.939
GF14341
Drosophila ananassae
FBgn0091368
I
0.901
GG25149
Drosophila erecta
FBgn0117274
I
0.931
GH10921
Drosophila grimshawi
FBgn0118402
I
0.885
GI13324
Drosophila mojavensis
FBgn0136081
I
0.878
GJ11954
Drosophila virilis
FBgn0199206
I
0.885
GK18317
Drosophila willistoni
FBgn0220315
I
0.879
GL26033
Drosophila persimilis
FBgn0163615
I
0.893
MDOA012045
Musca domestica
MDOA012045
I
0.773
stc
Drosophila melanogaster
FBgn0001978
D
0.962