CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28162.m000128
(
Ricinus communis
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01422 (zf-NF-X1)
IPR000967
28162.m000128
T300920_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28162.m000128
NFX
188
205
CGHHCLLLCHPGPCPSCP
28162.m000128
NFX
240
259
CNIHKCEKICHDGDCCPPCE
28162.m000128
NFX
294
312
CGKHVCERGCHSGECGECP
28162.m000128
NFX
348
367
CGLHKCHERCHRGQCIETCR
28162.m000128
NFX
401
419
CGRHACRRRCCDGDCPPCA
28162.m000128
NFX
422
446
CGKRLRCKNHKCPSPCHRGPCAPCP
28162.m000128
NFX
514
525
CGHKCNLRCHGP
28162.m000128
NFX
596
607
CGNHYCTKTCHA
28162.m000128
NFX
639
656
CAHLCPLACHPGECPPCK
28162.m000128
NFX
691
722
CGGSCHRKLPNCTHLCSETCHPGQCPSSDKCS
Links
Other
NFX
family TFs
Other
Ricinus communis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo9g177030
Brassica oleracea
Bo9g177030
N
0.751
Bra009123
Brassica rapa
Bra009123
N
0.751
ENSAMEG00000003238
Ailuropoda melanoleuca
ENSAMEG00000003238
N
0.705
evm.TU.supercontig_19.173
Carica papaya
evm.TU.supercontig_19.173
N
0.713
gene20971-v1.0-hybrid
Fragaria vesca
gene20971-v1.0-hybrid
N
0.783
LjT47B05.50.nd
Lotus japonicus
LjT47B05.50.nd
N
0.711
NFXL1
Equus caballus
ENSECAG00000022401
N
0.711
POPTR_0010s19600
Populus trichocarpa
POPTR_0010s19600
N
0.809
SapurV1A.0061s0270
Salix purpurea
SapurV1A.0061s0270
N
0.747
Si000223m.g
Setaria italica
Si000223m.g
N
0.740