CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE09163
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE09163
T302128_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG10466
M01295_2.00
Caenorhabditis briggsae
NDNNYGTRVY
RBYACRNNHN
PBM
Lambert et al.(2019)
pTH11473
0.840
0.754
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE09163
Nuclear receptor
6
76
PDCEICGFESQGFHFGVVACRACSAFFRRTAVCPKWSLKKCQNPKKCKKGKGGYQCKPCRLKRCYDVGMDT
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG10466
Caenorhabditis briggsae
CBG10466
D
0.840
CBN03188
Caenorhabditis brenneri
CBN03188
I
0.897
CBN14977
Caenorhabditis brenneri
CBN14977
I
0.962
nhr-132
Caenorhabditis elegans
WBGene00003722
I
0.904