CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CRE18428
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE18428
T302215_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-177
M02419_2.00
Caenorhabditis elegans
TCGRGANY
RNTCYCGA
PBM
Weirauch et al.(2014)
pTH9044
0.972
0.671
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE18428
Nuclear receptor
36
108
EKCQICFQQGHGYHFGVFACRACAAFFRRCHFSAALGQRKCRLMNGQCGPNRNGRWFCKKCRMDRCIQLGMTT
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene08188-v1.0-hybrid
Fragaria vesca
gene08188-v1.0-hybrid
N
0.000
MDP0000139206
Malus domestica
MDP0000139206
N
0.000
MDP0000171866
Malus domestica
MDP0000171866
N
0.000
MDP0000176749
Malus domestica
MDP0000176749
N
0.000
Pm020229
Prunus mume
Pm020229
N
0.000
PRUPE_ppa009299mg
Prunus persica
PRUPE_ppa009299mg
N
0.000