CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000014654
(
Poecilia formosa
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSPFOG00000014654
T304462_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Esrrg
M00817_2.00
Mus musculus
VAAGGTCA
TGACCTTB
PBM
Weirauch et al.(2013)
pTH3841
0.985
1.000
ESRRB
M03367_2.00
Homo sapiens
TCAAGGTCAWH
DWTGACCTTGA
SELEX
Jolma et al.(2013)
ESRRB_1
0.985
1.000
ESRRG
M03412_2.00
Homo sapiens
AAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTT
SELEX
Jolma et al.(2013)
ESRRG_1
0.985
1.000
ESRRG
M03413_2.00
Homo sapiens
AAGGTCANHCAAGGTCA
TGACCTTGDNTGACCTT
SELEX
Jolma et al.(2013)
ESRRG_2
0.985
1.000
ESRRG
M03414_2.00
Homo sapiens
YSAAGGTCAH
DTGACCTTSR
SELEX
Jolma et al.(2013)
ESRRG_3
0.985
1.000
ESRRB
M05595_2.00
Homo sapiens
BBSAAGGTCRH
DYGACCTTSVV
SELEX
Yin et al.(2017)
ESRRB_eDBD_HT-SELEX
0.985
1.000
ESRRG
M05673_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_eDBD_HT-SELEX
0.985
1.000
ESRRG
M05675_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_FL_HT-SELEX
0.985
1.000
ESRRB
M09272_2.00
Homo sapiens
BCAAGGTCA
TGACCTTGV
Misc
Kulakovskiy et al.(2013)
ERR2_HUMAN.H11MO.0.A
0.985
1.000
ESRRG
M09296_2.00
Homo sapiens
TCAAGGTCA
TGACCTTGA
Misc
Kulakovskiy et al.(2013)
ERR3_HUMAN.H11MO.0.B
0.985
1.000
Esrrg
M09321_2.00
Mus musculus
BSAAGGWCAB
VTGWCCTTSV
Misc
Kulakovskiy et al.(2013)
ERR3_MOUSE.H11MO.0.C
0.985
1.000
ESRRB
M11129_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_01
0.985
1.000
ESRRB
M11130_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_Q2
0.985
1.000
ESRRB
M11131_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR2_Q3
0.985
1.000
ESRRG
M11185_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR3_Q2_01
0.985
1.000
ESRRG
M11186_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR3_Q2
0.985
1.000
ESRRB
M05596_2.00
Homo sapiens
NNSAAGGTCRH
DYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRB_eDBD_Methyl-HT-SELEX
0.985
1.000
ESRRG
M05674_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_eDBD_Methyl-HT-SELEX
0.985
1.000
ESRRG
M05676_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRG_FL_Methyl-HT-SELEX
0.985
1.000
Esrrb
M08034_2.00
Mus musculus
NNBYCAAGGTCANNB
VNNTGACCTTGRVNN
ChIP-seq
Chen et al.(2011)
SRP000217_Esrrb
0.985
0.986
Esrrb
M09312_2.00
Mus musculus
NHDBTCAAGGTCANNBN
NVNNTGACCTTGAVHDN
Misc
Kulakovskiy et al.(2013)
ERR2_MOUSE.H11MO.0.A
0.985
0.986
Esrra
M00183_2.00
Mus musculus
VAAGGTCAH
DTGACCTTB
PBM
Badis et al.(2009)
Esrra_2190
0.976
0.914
ESRRA
M03397_2.00
Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN
SELEX
Jolma et al.(2013)
ESRRA_1
0.976
0.914
ESRRA
M03398_2.00
Homo sapiens
AAGGTCAWHCAAGGTCA
TGACCTTGDWTGACCTT
SELEX
Jolma et al.(2013)
ESRRA_2
0.976
0.914
ESRRA
M03399_2.00
Homo sapiens
SAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTS
SELEX
Jolma et al.(2013)
ESRRA_3
0.976
0.914
ESRRA
M03400_2.00
Homo sapiens
NYSAAGGTCAH
DTGACCTTSRN
SELEX
Jolma et al.(2013)
ESRRA_4
0.976
0.914
ESRRA
M03401_2.00
Homo sapiens
RAGGTCABNCAAGGTCA
TGACCTTGNVTGACCTY
SELEX
Jolma et al.(2013)
ESRRA_5
0.976
0.914
ESRRA
M03402_2.00
Homo sapiens
VAAGGTCAHNYSAAGGTCA
TGACCTTSRNDTGACCTTB
SELEX
Jolma et al.(2013)
ESRRA_6
0.976
0.914
Esrra
M03430_2.00
Mus musculus
DAGGTYAKTMAAGGTCA
TGACCTTKAMTRACCTH
SELEX
Jolma et al.(2013)
Esrra_1
0.976
0.914
Esrra
M03431_2.00
Mus musculus
KTCAAGGTCAT
ATGACCTTGAM
SELEX
Jolma et al.(2013)
Esrra_2
0.976
0.914
ESRRA
M05655_2.00
Homo sapiens
NNSAAGGTCAN
NTGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_eDBD_HT-SELEX
0.976
0.914
ESRRA
M05657_2.00
Homo sapiens
NNSAAGGTCAH
DTGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_FL_HT-SELEX
0.976
0.914
ESRRA
M07988_2.00
Homo sapiens
RGGKCASMNTGMCCY
RGGKCANKSTGMCCY
ChIP-seq
Gerstein et al.(2012)
ECC-1_ERALPHA_HudsonAlpha
0.976
0.914
ESRRA
M07989_2.00
Homo sapiens
NNRGGTCABNNTGHCCYNN
NNRGGDCANNVTGACCYNN
ChIP-seq
Gerstein et al.(2012)
T-47D_ERALPHA_HudsonAlpha
0.976
0.914
ESRRA
M09290_2.00
Homo sapiens
BYSAAGGTCANNNNN
NNNNNTGACCTTSRV
Misc
Kulakovskiy et al.(2013)
ERR1_HUMAN.H11MO.0.A
0.976
0.914
Esrra
M09319_2.00
Mus musculus
NNBYCAAGGTCA
TGACCTTGRVNN
Misc
Kulakovskiy et al.(2013)
ERR1_MOUSE.H11MO.0.A
0.976
0.914
ESRRA
M11168_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q2_01
0.976
0.914
ESRRA
M11169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q2
0.976
0.914
ESRRA
M11170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERR1_Q3
0.976
0.914
ESRRA
M11171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESRRA_10
0.976
0.914
ESRRA
M05656_2.00
Homo sapiens
NNSAAGGTCRN
NYGACCTTSNN
SELEX
Yin et al.(2017)
ESRRA_eDBD_Methyl-HT-SELEX
0.976
0.914
ESRRA
M05658_2.00
Homo sapiens
NBSAAGGTCRH
DYGACCTTSVN
SELEX
Yin et al.(2017)
ESRRA_FL_Methyl-HT-SELEX
0.976
0.914
ERR
M03941_2.00
Drosophila melanogaster
BSAAGGTCRH
DYGACCTTSV
SELEX
Nitta et al.(2015)
ERR_1
0.974
0.871
ERR
M06433_2.00
Drosophila melanogaster
MAAGGTCA
TGACCTTK
B1H
Zhu et al.(2011)
ERR_SANGER_5_FBgn0035849
0.974
0.871
Esr1
M00813_2.00
Mus musculus
NRKGTCANNN
NNNTGACMYN
PBM
Weirauch et al.(2013)
pTH3510
0.844
0.714
ESR1
M03356_2.00
Homo sapiens
NRGGTCAMVRTGACCTK
MAGGTCAYBKTGACCYN
SELEX
Jolma et al.(2013)
ESR1_1
0.844
0.714
ESR1
M05569_2.00
Homo sapiens
NAGGTCAYSRTGACCTN
NAGGTCAYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX
0.844
0.714
ESR1
M05571_2.00
Homo sapiens
NRGGTCANSNTGACCYN
NRGGTCANSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX
0.844
0.714
ESR1
M07985_2.00
Homo sapiens
DNBYMAAGGTCANN
NNTGACCTTKRVNH
ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford
0.844
0.714
ESR1
M08217_2.00
Homo sapiens
NHNRGGTCANNNTGNCCY
RGGNCANNNTGACCYNDN
ChIP-seq
Contrino et al.(2012)
Mv66
0.844
0.714
ESR1
M08218_2.00
Homo sapiens
CCAAGGTCAS
STGACCTTGG
ChIP-seq
Contrino et al.(2012)
Mv67
0.844
0.714
ESR1
M09267_2.00
Homo sapiens
RGGKCABMNTGMCCY
RGGKCANKVTGMCCY
Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A
0.844
0.714
Esr1
M09309_2.00
Mus musculus
RGGDCABKSTGWCCY
RGGWCASMVTGHCCY
Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A
0.844
0.714
ESR1
M09604_2.00
Homo sapiens
NRGGTCANNNTGACC
GGTCANNNTGACCYN
Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished
0.844
0.714
ESR1
M11098_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_01
0.844
0.714
ESR1
M11099_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q4
0.844
0.714
ESR1
M11100_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01
0.844
0.714
ESR1
M11101_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02
0.844
0.714
ESR1
M11102_2.00
Homo sapiens
NHRGGTCAVNNHNNHYBNN
NNVRDNNDNNBTGACCYDN
Transfac
Matys et al.(2006)
V$ER_Q6
0.844
0.714
ESR1
M11103_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_04
0.844
0.714
ESR1
M11104_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ESR1_05
0.844
0.714
ESR1
M05570_2.00
Homo sapiens
NAGGTCAYSRYGACCTH
DAGGTCRYSRTGACCTN
SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX
0.844
0.714
ESR1
M05572_2.00
Homo sapiens
NRGGTCANSBYGACCYN
NRGGTCRVSNTGACCYN
SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX
0.844
0.714
Esr2
M01297_2.00
Mus musculus
NNRGGTCAH
DTGACCYNN
PBM
Lambert et al.(2019)
pTH3511
0.839
0.700
ESR2
M08154_2.00
Homo sapiens
RGGTCASNNWGNCCY
RGGNCWNNSTGACCY
ChIP-seq
Mathelier et al.(2014)
MA0258.2
0.839
0.700
ESR2
M09279_2.00
Homo sapiens
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A
0.839
0.700
Esr2
M09311_2.00
Mus musculus
RGGKCRVRSYGMCCY
RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A
0.839
0.700
ESR2
M11146_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5_01
0.839
0.700
ESR2
M11147_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5
0.839
0.700
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.824
0.686
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000014704
Nuclear receptor
145
214
RLCLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLK
Links
Other
Nuclear receptor
family TFs
Other
Poecilia formosa
TFs
461 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_079180
Acremonium chrysogenum
ACRE_079180
I
0.000
BBA_04449
Beauveria bassiana
BBA_04449
I
0.000
Bcin07g02960
Botrytis cinerea
Bcin07g02960
I
0.000
BOTBODRAFT_92498
Botryobasidium botryosum
BOTBODRAFT_92498
I
0.000
CCM_07005
Cordyceps militaris
CCM_07005
I
0.000
CFIO01_10932
Colletotrichum fioriniae
CFIO01_10932
I
0.000
CGGC5_4872
Colletotrichum gloeosporioides
CGGC5_4872
I
0.000
CH063_09324
Colletotrichum higginsianum
CH063_09324
I
0.000
CHGG_05891
Chaetomium globosum
CHGG_05891
I
0.000
CMQ_8013
Grosmannia clavigera
CMQ_8013
I
0.000
Cob_08105
Colletotrichum orbiculare
Cob_08105
I
0.000
CPUR_03253
Claviceps purpurea
CPUR_03253
I
0.000
CSUB01_03838
Colletotrichum sublineola
CSUB01_03838
I
0.000
CTHT_0009000
Chaetomium thermophilum
CTHT_0009000
I
0.000
estExt_fgenesh1_pm.C_140003
Cryphonectria parasitica
estExt_fgenesh1_pm.C_140003
I
0.000
estExt_Genewise1.C_40527
Neurospora discreta
estExt_Genewise1.C_40527
I
0.000
F503_01009
Ophiostoma piceae uamh
F503_01009
I
0.000
FFUJ_01365
Fusarium fujikuroi
FFUJ_01365
I
0.000
FGRRES_15831
Fusarium graminearum
FGRRES_15831
I
0.000
FOXG_00218
Fusarium oxysporum
FOXG_00218
I
0.000
FPSE_02604
Fusarium pseudograminearum
FPSE_02604
I
0.000
FVEG_01300
Fusarium verticillioides
FVEG_01300
I
0.000
GGTG_04163
Gaeumannomyces graminis
GGTG_04163
I
0.000
GLRG_04053
Colletotrichum graminicola
GLRG_04053
I
0.000
HMPREF1624_03694
Sporothrix schenckii
HMPREF1624_03694
I
0.000
MAC_04202
Metarhizium acridum
MAC_04202
I
0.000
MAJ_02156
Metarhizium majus
MAJ_02156
I
0.000
MAM_07644
Metarhizium album
MAM_07644
I
0.000
MANI_024675
Metarhizium anisopliae
MANI_024675
I
0.000
MAPG_00558
Magnaporthe poae
MAPG_00558
I
0.000
MBR_03633
Metarhizium brunneum
MBR_03633
I
0.000
MGG_10837
Magnaporthe oryzae
MGG_10837
I
0.000
MGU_04823
Metarhizium guizhouense
MGU_04823
I
0.000
MYCTH_2296905
Myceliophthora thermophila
MYCTH_2296905
I
0.000
NCU02957
Neurospora crassa
NCU02957
D
0.000
NEUTE1DRAFT_150703
Neurospora tetrasperma
NEUTE1DRAFT_150703
I
0.000
OIDMADRAFT_110480
Oidiodendron maius
OIDMADRAFT_110480
I
0.000
OIDMADRAFT_57256
Oidiodendron maius
OIDMADRAFT_57256
I
0.000
PFICI_01786
Pestalotiopsis fici
PFICI_01786
I
0.000
PODANS_1_18420
Podospora anserina
PODANS_1_18420
I
0.000
S40285_00887
Stachybotrys chlorohalonata
S40285_00887
I
0.000
S40288_08146
Stachybotrys chartarum
S40288_08146
I
0.000
SAPIO_CDS5040
Scedosporium apiospermum
SAPIO_CDS5040
I
0.000
SBOR_5241
Sclerotinia borealis
SBOR_5241
I
0.000
SMAC_00493
Sordaria macrospora
SMAC_00493
I
0.000
SPBR_01576
Sporothrix brasiliensis
SPBR_01576
I
0.000
SS1G_01995
Sclerotinia sclerotiorum
SS1G_01995
I
0.000
THITE_2112332
Thielavia terrestris
THITE_2112332
I
0.000
TRIATDRAFT_299973
Trichoderma atroviride
TRIATDRAFT_299973
I
0.000
TRIREDRAFT_122371
Trichoderma reesei
TRIREDRAFT_122371
I
0.000
TRIVIDRAFT_35604
Trichoderma virens
TRIVIDRAFT_35604
I
0.000
UV8b_5697
Ustilaginoidea virens
UV8b_5697
I
0.000
VDAG_03292
Verticillium dahliae
VDAG_03292
I
0.000
VDBG_06134
Verticillium alfalfae
VDBG_06134
I
0.000
VDBG_06134
Verticillium albo atrum
VDBG_06134
I
0.000
X797_003690
Metarhizium robertsii
X797_003690
I
0.000