CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HelroG79060
(
Helobdella robusta
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
HelroG79060
T305591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HelroP79060
Nuclear receptor
1
68
VCGDVAAGFHCGAYVCEACKKFFLRCLKTGRGLMFLCPKNSNCDITKETRSHCQRCRYQRCIALSMYK
HelroP79060
Nuclear receptor
82
153
IPCKVCKAPSSGFHFGAITCEGCKGFFRRMLKEQVHRKFICSNDERCNIDSANRTTCKSCRFNKCIKIGMTL
Links
Other
Nuclear receptor
family TFs
Other
Helobdella robusta
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004852
Oryza indica
BGIOSGA004852
N
BGIOSGA017964
Oryza indica
BGIOSGA017964
N
BGIOSGA017965
Oryza indica
BGIOSGA017965
N
BRADI2G55797
Brachypodium distachyon
BRADI2G55797
N
F775_31610
Aegilops tauschii
F775_31610
N
GRMZM2G027914
Zea mays
GRMZM2G027914
N
GRMZM2G091201
Zea mays
GRMZM2G091201
N
GRMZM2G143640
Zea mays
GRMZM2G143640
N
GSMUA_Achr11G09110_001
Musa acuminata
GSMUA_Achr11G09110_001
N
LPERR01G32800
Leersia perrieri
LPERR01G32800
N
LPERR05G14380
Leersia perrieri
LPERR05G14380
N
MDP0000289018
Malus domestica
MDP0000289018
I
OB05G25990
Oryza brachyantha
OB05G25990
N
OBART01G38220
Oryza barthii
OBART01G38220
N
OBART05G18190
Oryza barthii
OBART05G18190
N
OGLUM01G42400
Oryza glumaepatula
OGLUM01G42400
N
OGLUM05G19230
Oryza glumaepatula
OGLUM05G19230
N
OGLUM05G19240
Oryza glumaepatula
OGLUM05G19240
N
OLONG_005649
Oryza longistaminata
OLONG_005649
N
OMERI01G35110
Oryza meridionalis
OMERI01G35110
N
ONIVA01G42920
Oryza nivara
ONIVA01G42920
N
ONIVA05G19090
Oryza nivara
ONIVA05G19090
N
OPUNC01G36990
Oryza punctata
OPUNC01G36990
N
ORGLA01G0320500
Oryza glaberrima
ORGLA01G0320500
N
ORGLA05G0157700
Oryza glaberrima
ORGLA05G0157700
N
ORUFI01G41590
Oryza rufipogon
ORUFI01G41590
N
ORUFI05G19330
Oryza rufipogon
ORUFI05G19330
N
ORUFI05G19340
Oryza rufipogon
ORUFI05G19340
N
OS01G0863300
Oryza sativa
OS01G0863300
N
OS05G0442400
Oryza sativa
OS05G0442400
N
Pavir.Ea03744
Panicum virgatum
Pavir.Ea03744
N
Pavir.J02275
Panicum virgatum
Pavir.J02275
N
Pavir.J08778
Panicum virgatum
Pavir.J08778
N
Sb03g040730
Sorghum bicolor
Sb03g040730
N
Sb09g021770
Sorghum bicolor
Sb09g021770
N
Si003047m.g
Setaria italica
Si003047m.g
N
Si023363m.g
Setaria italica
Si023363m.g
N
TRAES3BF019300020CFD_g
Triticum aestivum
TRAES3BF019300020CFD_g
N