nhr-1 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003600 T306125_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00		 Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.956 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00686_2.00 Nuclear receptor 51 120

DNA Binding Domains

Protein ID Domain From To Sequence
R09G11.2a.1 Nuclear receptor 71 140
R09G11.2a.2 Nuclear receptor 71 140
R09G11.2c.1 Nuclear receptor 71 140
R09G11.2c.2 Nuclear receptor 71 140
R09G11.2d.1 Nuclear receptor 71 140
R09G11.2d.2 Nuclear receptor 71 140

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action