CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-253
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00022639
T306388_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ZK6.4
Nuclear receptor
6
76
QKCAVCERFTTEFNYGVPSCNACKIFFRRLITRTTPVKKCYLGENCFTKTPITQKCVFCRFQKCIQVGMTL
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN946_scf184980.g5
Trametes cinnabarina
BN946_scf184980.g5
N
CERSUDRAFT_117628
Ceriporiopsis subvermispora
CERSUDRAFT_117628
N
estExt_fgenesh2_pg.C_110284
Heterobasidion annosum
estExt_fgenesh2_pg.C_110284
N
fgenesh1_pg.C_scaffold_7000002
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000002
N
FIBRA_06476
Fibroporia radiculosa
FIBRA_06476
N
FOMPIDRAFT_1111238
Fomitopsis pinicola
FOMPIDRAFT_1111238
N
GLOTRDRAFT_139468
Gloeophyllum trabeum
GLOTRDRAFT_139468
N
HETIRDRAFT_458619
Heterobasidion irregulare
HETIRDRAFT_458619
N
JAAARDRAFT_35789
Jaapia argillacea
JAAARDRAFT_35789
N
M408DRAFT_150672
Serendipita vermifera
M408DRAFT_150672
N
PHACADRAFT_182583
Phanerochaete carnosa
PHACADRAFT_182583
N
PHLGIDRAFT_92699
Phlebiopsis gigantea
PHLGIDRAFT_92699
N
POSPLDRAFT_99485
Postia placenta
POSPLDRAFT_99485
N
V565_049200
Rhizoctonia solani
V565_049200
N