Cflo_07896--XP_396918.3_APIME (Camponotus floridanus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Cflo_07896--XP_396918.3_APIME T306597_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr39
M03942_2.00 		Drosophila melanogaster
CAAGGHCRN
NYGDCCTTG		 SELEX
Nitta et al.(2015)
Hr39_1 		0.986 0.857
Hr39
M03943_2.00 		Drosophila melanogaster
CAAGGYCRH
DYGRCCTTG		 SELEX
Nitta et al.(2015)
Hr39_2 		0.986 0.857
NR5A2
M05589_2.00 		Homo sapiens
YCAAGGYCRYGRCCTTSR
YSAAGGYCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1 		0.952 0.614
NR5A2
M05590_2.00 		Homo sapiens
NYCAAGGTCAH
DTGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2 		0.952 0.614
NR5A2
M05591_2.00 		Homo sapiens
YGRCCTTSVNYSAAGGYCR
YGRCCTTSRNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3 		0.952 0.614
NR5A2
M09271_2.00 		Homo sapiens
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B 		0.952 0.614
NR5A2
M11126_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5_01 		0.952 0.614
NR5A2
M11127_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q5 		0.952 0.614
NR5A2
M11128_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRH1_Q6 		0.952 0.614
NR5A2
M05592_2.00 		Homo sapiens
YCAAGGYCRYGACCTTSR
YSAAGGTCRYGRCCTTGR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1 		0.952 0.614
NR5A2
M05593_2.00 		Homo sapiens
NYCAAGGTCRH
DYGACCTTGRN		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2 		0.952 0.614
NR5A2
M05594_2.00 		Homo sapiens
YGRCCTTSVNBSAAGGYCR
YGRCCTTSVNBSAAGGYCR		 SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3 		0.952 0.614
Nr5a2
M00816_2.00 		Mus musculus
VAAGGTCR
YGACCTTB		 PBM
Weirauch et al.(2013)
pTH3468 		0.950 0.600
Nr5a2
M08158_2.00 		Mus musculus
VRDBTCAAGGYCANN
NNTGRCCTTGAVHYB		 ChIP-seq
Mathelier et al.(2014)
MA0505.1 		0.950 0.600
Nr5a2
M09320_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A 		0.950 0.600
Nr5a2
M09616_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295 		0.950 0.600
Nr5a2
M09615_2.00 		Mus musculus
BYCAAGGYCA
TGRCCTTGRV		 Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019 		0.950 0.600
NR5A1
M05613_2.00 		Homo sapiens
NNCAAGGYCRN
NYGRCCTTGNN		 SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX 		0.949 0.600
Nr5a1
M09322_2.00 		Mus musculus
NBYCAAGGYCA
TGRCCTTGRVN		 Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B 		0.949 0.600
NR5A1
M11142_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5_01 		0.949 0.600
NR5A1
M11143_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q5 		0.949 0.600
NR5A1
M11144_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6_01 		0.949 0.600
NR5A1
M11145_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SF1_Q6 		0.949 0.600
NR5A1
M05614_2.00 		Homo sapiens
NNSAAGGHCRN
NYGDCCTTSNN		 SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX 		0.949 0.600
ftz-f1
M02407_2.00 		Drosophila melanogaster
RRGGTCAH
DTGACCYY		 PBM
Weirauch et al.(2014)
pTH5709 		0.947 0.614
ftz-f1
M06417_2.00 		Drosophila melanogaster
MMRKYYSAAGGWCRCYGM
KCRGYGWCCTTSRRMYKK		 B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078 		0.947 0.614
ftz-f1
M06418_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078 		0.947 0.614
nhr-25
M08226_2.00 		Caenorhabditis elegans
MAAGGTCA
TGACCTTK		 ChIP-seq
Contrino et al.(2012)
Mw160 		0.947 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_07896--XP_396918.3_APIME Nuclear receptor 518 587

Links

Other Nuclear receptor family TFs
Other Camponotus floridanus TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAG00000037906 Bos taurus ENSBTAG00000037906 I
ENSCSAG00000002005 Chlorocebus sabaeus ENSCSAG00000002005 I
ENSMMUP00000030454 Macaca fascicularis ENSMMUP00000030454 I
ENSNLEG00000005972 Nomascus leucogenys ENSNLEG00000005972 I
ENSNLEG00000005978 Nomascus leucogenys ENSNLEG00000005978 I
ENSPANG00000012793 Papio anubis ENSPANG00000012793 I
ENSPPYG00000010330 Pongo abelii ENSPPYG00000010330 I
ENSPPYG00000010331 Pongo abelii ENSPPYG00000010331 I
ENSVPAG00000006670 Vicugna pacos ENSVPAG00000006670 I
ZNF350 Dasypus novemcinctus ENSDNOG00000018413 I
ZNF350 Homo sapiens ENSG00000256683 D
ZNF350 Microcebus murinus ENSMICG00000008103 I
ZNF350 Macaca mulatta ENSMMUG00000023137 I
ZNF350 Choloepus hoffmanni ENSCHOG00000011218 I
ZNF350 Otolemur garnettii ENSOGAG00000013266 I
ZNF350 Pan troglodytes ENSPTRG00000011402 I
ZNF350 Canis familiaris ENSCAFG00000003371 I
ZNF432 Callithrix jacchus ENSCJAG00000002045 I
ZNF432 Pan troglodytes ENSPTRG00000023042 I
ZNF615 Homo sapiens ENSG00000197619 D