CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPAI008488
(
Phlebotomus papatasi
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
PPAI008488
T307859_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dsf
M06431_2.00
Drosophila melanogaster
AAAAGTCANH
DNTGACTTTT
B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381
0.983
0.971
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN
NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.954
0.800
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN
NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.954
0.800
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN
NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.954
0.800
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA
TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.954
0.800
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.954
0.800
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW
WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.954
0.800
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.954
0.800
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN
NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.954
0.800
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN
NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.954
0.800
tll
M02408_2.00
Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN
PBM
Weirauch et al.(2014)
pTH5714
0.872
0.743
tll
M03932_2.00
Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN
SELEX
Nitta et al.(2015)
tll_1
0.872
0.743
tll
M03933_2.00
Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN
SELEX
Nitta et al.(2015)
tll_2
0.872
0.743
tll
M06558_2.00
Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW
B1H
Mathelier et al.(2014)
MA0459.1
0.872
0.743
tll
M06424_2.00
Drosophila melanogaster
AAAGTYA
TRACTTT
B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720
0.872
0.743
tll
M06425_2.00
Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW
B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720
0.872
0.743
tll
M09688_2.00
Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK
Misc
Kulakovskiy et al.(2009)
tll
0.872
0.743
tll
M11190_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TLL_Q6
0.872
0.743
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPAI008488-PA
Nuclear receptor
10
83
IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGEMKGRCPVDKTHRNQCRACRLAKCFQSSMNK
Links
Other
Nuclear receptor
family TFs
Other
Phlebotomus papatasi
TFs
320 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_066890
Acremonium chrysogenum
ACRE_066890
N
BBA_03726
Beauveria bassiana
BBA_03726
N
CCM_09473
Cordyceps militaris
CCM_09473
N
CFIO01_12148
Colletotrichum fioriniae
CFIO01_12148
N
CGGC5_5960
Colletotrichum gloeosporioides
CGGC5_5960
N
CH063_03988
Colletotrichum higginsianum
CH063_03988
N
CHGG_05553
Chaetomium globosum
CHGG_05553
N
CMQ_2186
Grosmannia clavigera
CMQ_2186
N
Cob_05316
Colletotrichum orbiculare
Cob_05316
N
CPUR_01030
Claviceps purpurea
CPUR_01030
N
CSUB01_07297
Colletotrichum sublineola
CSUB01_07297
N
CTHT_0071410
Chaetomium thermophilum
CTHT_0071410
N
estExt_fgenesh1_pg.C_sca_20_chr6_4_00401
Nectria haematococca
estExt_fgenesh1_pg.C_sca_20_chr6_4_00401
N
estExt_Genewise1.C_11653
Cryphonectria parasitica
estExt_Genewise1.C_11653
N
FFUJ_09592
Fusarium fujikuroi
FFUJ_09592
N
FGRRES_04147
Fusarium graminearum
FGRRES_04147
N
FOXG_11487
Fusarium oxysporum
FOXG_11487
N
FPSE_00166
Fusarium pseudograminearum
FPSE_00166
N
FVEG_10334
Fusarium verticillioides
FVEG_10334
N
GGTG_01098
Gaeumannomyces graminis
GGTG_01098
N
GLRG_00397
Colletotrichum graminicola
GLRG_00397
N
HMPREF1624_02497
Sporothrix schenckii
HMPREF1624_02497
N
MAC_01668
Metarhizium acridum
MAC_01668
N
MAJ_02361
Metarhizium majus
MAJ_02361
N
MAM_00154
Metarhizium album
MAM_00154
N
MANI_015509
Metarhizium anisopliae
MANI_015509
N
MAPG_08127
Magnaporthe poae
MAPG_08127
N
MBR_02837
Metarhizium brunneum
MBR_02837
N
MGG_05295
Magnaporthe oryzae
MGG_05295
N
MGU_00174
Metarhizium guizhouense
MGU_00174
N
NechaG100939
Fusarium solani
NechaG100939
N
PFICI_04053
Pestalotiopsis fici
PFICI_04053
N
S40285_04583
Stachybotrys chlorohalonata
S40285_04583
N
S40288_04750
Stachybotrys chartarum
S40288_04750
N
SMAC_02129
Sordaria macrospora
SMAC_02129
N
SPBR_02586
Sporothrix brasiliensis
SPBR_02586
N
THITE_134757
Thielavia terrestris
THITE_134757
N
TRIATDRAFT_298085
Trichoderma atroviride
TRIATDRAFT_298085
N
TRIREDRAFT_21900
Trichoderma reesei
TRIREDRAFT_21900
N
TRIVIDRAFT_209431
Trichoderma virens
TRIVIDRAFT_209431
N
UCREL1_8507
Eutypa lata
UCREL1_8507
N
UCRPA7_5358
Togninia minima
UCRPA7_5358
N
UV8b_2558
Ustilaginoidea virens
UV8b_2558
N
VDAG_05665
Verticillium dahliae
VDAG_05665
N
VDBG_06612
Verticillium alfalfae
VDBG_06612
N
VDBG_06612
Verticillium albo atrum
VDBG_06612
N
VHEMI08412
Torrubiella hemipterigena
VHEMI08412
N
X797_000893
Metarhizium robertsii
X797_000893
N