CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000980501
(
Ascaris lumbricoides
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ALUE_0000980501
T307947_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odr-7
M00697_2.00
Caenorhabditis elegans
NDWTTGTAGNN
NNCTACAAWHN
PBM
Narasimhan et al.(2015)
pTH9323
0.901
0.771
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000980501-mRNA-1
Nuclear receptor
176
250
QPCQVCMTAVSNGLHFGAKTCAACAAFFRRTISDQKRYVCKRSQRCGMKVNDVTGYRKICRSCRMKRCLDVGMLP
Links
Other
Nuclear receptor
family TFs
Other
Ascaris lumbricoides
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL008005
Aedes aegypti
AAEL008005
N
ACEP23771
Atta cephalotes
ACEP23771
N
GA17655
Drosophila pseudoobscura
FBgn0077666
N
GB50960
Apis mellifera
GB50960
N
GD14182
Drosophila simulans
FBgn0185869
N
GE20840
Drosophila yakuba
FBgn0238131
N
GF25133
Drosophila ananassae
FBgn0102125
N
GG15376
Drosophila erecta
FBgn0107628
N
GH15946
Drosophila grimshawi
FBgn0123417
N
GI16598
Drosophila mojavensis
FBgn0139346
N
GJ12850
Drosophila virilis
FBgn0200085
N
GL17877
Drosophila persimilis
FBgn0155480
N
GM25148
Drosophila sechellia
FBgn0180009
N
LCUP008453
Lucilia cuprina
LCUP008453
N
LDEC021755
Leptinotarsa decemlineata
LDEC021755
N
LLOJ005404
Lutzomyia longipalpis
LLOJ005404
N
MDOA009916
Musca domestica
MDOA009916
N
MTF-1
Drosophila melanogaster
FBgn0040305
N
NV16132
Nasonia vitripennis
NV16132
N
PPAI003792
Phlebotomus papatasi
PPAI003792
N