BTMF_0000217201 (Brugia timori)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 BTMF_0000217201 T308236_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.994 0.886
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.961 0.643
Hnf4
M03935_2.00 		Drosophila melanogaster
RGGKCAAAGGTCA
TGACCTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_1 		0.813 0.557
Hnf4
M03936_2.00 		Drosophila melanogaster
RGGKCAAAGTYCA
TGRACTTTGMCCY		 SELEX
Nitta et al.(2015)
Hnf4_2 		0.813 0.557
Hnf4
M03937_2.00 		Drosophila melanogaster
RGTVCAAAGKTCR
YGAMCTTTGBACY		 SELEX
Nitta et al.(2015)
Hnf4_3 		0.813 0.557
Hnf4
M03938_2.00 		Drosophila melanogaster
RTGRACTTTGGACY
RGTCCAAAGTYCAY		 SELEX
Nitta et al.(2015)
Hnf4_4 		0.813 0.557
Hnf4
M06428_2.00 		Drosophila melanogaster
DKNKWSSNGGGGTCA
TGACCCCNSSWMNMH		 B1H
Zhu et al.(2011)
Hnf4_SANGER_10_FBgn0004914 		0.813 0.557
Hnf4
M06429_2.00 		Drosophila melanogaster
GGGGTCAH
DTGACCCC		 B1H
Zhu et al.(2011)
Hnf4_SANGER_5_FBgn0004914 		0.813 0.557
Hnf4a
M00182_2.00 		Mus musculus
NNRGKYMRNN
NNYKRMCYNN		 PBM
Badis et al.(2009)
Hnf4a_2640 		0.808 0.557
HNF4A
M03357_2.00 		Homo sapiens
RWTGRACTTTGSACYB
VRGTSCAAAGTYCAWY		 SELEX
Jolma et al.(2013)
HNF4A_1 		0.808 0.557
HNF4A
M03358_2.00 		Homo sapiens
RRGGKCAAAGTCCRBN
NVYGGACTTTGMCCYY		 SELEX
Jolma et al.(2013)
HNF4A_2 		0.808 0.557
HNF4A
M03359_2.00 		Homo sapiens
NDTGGACTTTGDACYB
VRGTHCAAAGTCCAHN		 SELEX
Jolma et al.(2013)
HNF4A_3 		0.808 0.557
HNF4A
M03360_2.00 		Homo sapiens
RRGGTCAAAGKTCA
TGAMCTTTGACCYY		 SELEX
Jolma et al.(2013)
HNF4A_4 		0.808 0.557
HNF4A
M03361_2.00 		Homo sapiens
VRGGTCAAAGTCCANN
NNTGGACTTTGACCYB		 SELEX
Jolma et al.(2013)
HNF4A_5 		0.808 0.557
HNF4A
M03362_2.00 		Homo sapiens
RRGTYCAAAGKTCAH
DTGAMCTTTGRACYY		 SELEX
Jolma et al.(2013)
HNF4A_6 		0.808 0.557
Hnf4a
M03426_2.00 		Mus musculus
RRGGTCAAAGTCCANN
NNTGGACTTTGACCYY		 SELEX
Jolma et al.(2013)
Hnf4a_1 		0.808 0.557
HNF4A
M05573_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_1 		0.808 0.557
HNF4A
M05574_2.00 		Homo sapiens
RRGGTCAAAGTCCAH
DTGGACTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_2 		0.808 0.557
HNF4A
M05575_2.00 		Homo sapiens
RRGTCCAAAGGTCRN
NYGACCTTTGGACYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_3 		0.808 0.557
HNF4A
M05576_2.00 		Homo sapiens
DTGGACTTTGGACYY
RRGTCCAAAGTCCAH		 SELEX
Yin et al.(2017)
HNF4A_eDBD_HT-SELEX_4 		0.808 0.557
HNF4A
M08219_2.00 		Homo sapiens
VRGDBCAAAGKYCAN
NTGRMCTTTGVHCYB		 ChIP-seq
Contrino et al.(2012)
Mv81 		0.808 0.557
HNF4A
M08220_2.00 		Homo sapiens
AGTCCA
TGGACT		 ChIP-seq
Contrino et al.(2012)
Mv82 		0.808 0.557
HNF4A
M09268_2.00 		Homo sapiens
VRGKNCAAAGTYCA
TGRACTTTGNMCYB		 Misc
Kulakovskiy et al.(2013)
HNF4A_HUMAN.H11MO.0.A 		0.808 0.557
Hnf4a
M09308_2.00 		Mus musculus
NRGKBCAAAGTYCA
TGRACTTTGVMCYN		 Misc
Kulakovskiy et al.(2013)
HNF4A_MOUSE.H11MO.0.A 		0.808 0.557
HNF4A
M09605_2.00 		Homo sapiens
NNVRGDNCAAAGKYCA
TGRMCTTTGNHCYBNN		 Misc
Heinz et al.(2010)
HepG2-HNF4a_GSE25021 		0.808 0.557
HNF4A
M11105_2.00 		Homo sapiens
VRGGNCAAAGKYCRB
VYGRMCTTTGNCCYB		 Transfac
Matys et al.(2006)
V$HNF4_01_B 		0.808 0.557
HNF4A
M11106_2.00 		Homo sapiens
NNNRGDBYAAAGKBCANND
HNNTGVMCTTTRVHCYNNN		 Transfac
Matys et al.(2006)
V$HNF4_01 		0.808 0.557
HNF4A
M11107_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_09 		0.808 0.557
HNF4A
M11108_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_10 		0.808 0.557
HNF4A
M11109_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4ALPHA_Q6 		0.808 0.557
HNF4A
M11110_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_Q3 		0.808 0.557
HNF4A
M11111_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4A_Q6_01 		0.808 0.557
HNF4A
M11112_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_01 		0.808 0.557
HNF4A
M11113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_02 		0.808 0.557
HNF4A
M11114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_03 		0.808 0.557
HNF4A
M11115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4_Q6_04 		0.808 0.557
HNF4A
M05577_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_1 		0.808 0.557
HNF4A
M05578_2.00 		Homo sapiens
RRGGTCAAAGTCCRN
NYGGACTTTGACCYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_2 		0.808 0.557
HNF4A
M05579_2.00 		Homo sapiens
RRGTCCAAAGGTCRN
NYGACCTTTGGACYY		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_3 		0.808 0.557
HNF4A
M05580_2.00 		Homo sapiens
DTGGACTTTGGACYY
RRGTCCAAAGTCCAH		 SELEX
Yin et al.(2017)
HNF4A_eDBD_Methyl-HT-SELEX_4 		0.808 0.557
HNF4G
M08155_2.00 		Homo sapiens
NVRGDNCAAAGKYCA
TGRMCTTTGNHCYBN		 ChIP-seq
Mathelier et al.(2014)
MA0484.1 		0.805 0.557
HNF4G
M09287_2.00 		Homo sapiens
VRGDNCAAAGKYCA
TGRMCTTTGNHCYB		 Misc
Kulakovskiy et al.(2013)
HNF4G_HUMAN.H11MO.0.B 		0.805 0.557
Hnf4g
M09307_2.00 		Mus musculus
VRGDNCAAAGKYCA
TGRMCTTTGNHCYB		 Misc
Kulakovskiy et al.(2013)
HNF4G_MOUSE.H11MO.0.C 		0.805 0.557
HNF4G
M11155_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4G_01 		0.805 0.557
HNF4G
M11156_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF4G_02 		0.805 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BTMF_0000217201-mRNA-1 Nuclear receptor 100 169

Links

Other Nuclear receptor family TFs
Other Brugia timori TFs

536 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R001407 Calypte anna Aan_R001407 I
Afo_R004252 Aptenodytes forsteri Afo_R004252 I
Alligator_sinensis_CCG008345.1 Alligator sinensis Alligator_sinensis_CCG008345.1 I
Brh_R004761 Buceros rhinoceros Brh_R004761 I
Cmyd_10004923 Chelonia mydas Cmyd_10004923 I
ENSAMEG00000013007 Ailuropoda melanoleuca ENSAMEG00000013007 I
ENSAMXG00000001402 Astyanax mexicanus ENSAMXG00000001402 I
ENSAPLG00000004837 Anas platyrhynchos ENSAPLG00000004837 I
ENSCSAG00000002585 Chlorocebus sabaeus ENSCSAG00000002585 I
ENSFALG00000009959 Ficedula albicollis ENSFALG00000009959 I
ENSFCAG00000031139 Felis catus ENSFCAG00000031139 I
ENSGALG00000006818 Gallus gallus ENSGALG00000006818 I
ENSGMOG00000011724 Gadus morhua ENSGMOG00000011724 I
ENSLACG00000018124 Latimeria chalumnae ENSLACG00000018124 I
ENSLOCG00000004045 Lepisosteus oculatus ENSLOCG00000004045 I
ENSMEUG00000000157 Macropus eugenii ENSMEUG00000000157 I
ENSMPUG00000004640 Mustela putorius furo ENSMPUG00000004640 I
ENSNLEG00000007365 Nomascus leucogenys ENSNLEG00000007365 I
ENSOANG00000003760 Ornithorhynchus anatinus ENSOANG00000003760 I
ENSOARG00000009830 Ovis aries ENSOARG00000009830 I
ENSONIG00000006229 Oreochromis niloticus ENSONIG00000006229 I
ENSP00000352262-D1 Bos grunniens ENSP00000352262-D1 I
ENSPANG00000009309 Papio anubis ENSPANG00000009309 I
ENSPFOG00000015779 Poecilia formosa ENSPFOG00000015779 I
ENSPPYG00000003935 Pongo abelii ENSPPYG00000003935 I
ENSPSIG00000007140 Pelodiscus sinensis ENSPSIG00000007140 I
ENSSHAG00000012641 Sarcophilus harrisii ENSSHAG00000012641 I
ENSSTOG00000014405 Ictidomys tridecemlineatus ENSSTOG00000014405 I
ENSTSYG00000012197 Tarsius syrichta ENSTSYG00000012197 I
ENSXMAG00000008735 Xiphophorus maculatus ENSXMAG00000008735 I
Gfo_R005086 Geospiza fortis Gfo_R005086 I
KMT2A Tursiops truncatus ENSTTRG00000004289 I
KMT2A Oryctolagus cuniculus ENSOCUG00000010127 I
kmt2a Xenopus tropicalis XB-GENE-922912 D
KMT2A Pan troglodytes ENSPTRG00000004344 I
KMT2A Pteropus vampyrus ENSPVAG00000006246 I
KMT2A Vicugna pacos ENSVPAG00000005587 I
KMT2A Taeniopygia guttata ENSTGUG00000000065 I
Kmt2a Rattus norvegicus ENSRNOG00000015133 I
KMT2A Sorex araneus ENSSARG00000014520 I
KMT2A Tupaia belangeri ENSTBEG00000010928 I
kmt2a Takifugu rubripes ENSTRUG00000015266 I
kmt2a Tetraodon nigroviridis ENSTNIG00000019281 I
kmt2a Oryzias latipes ENSORLG00000007666 I
KMT2A Bos taurus ENSBTAG00000018093 I
KMT2A Canis familiaris ENSCAFG00000012691 I
KMT2A Choloepus hoffmanni ENSCHOG00000007116 I
KMT2A Callithrix jacchus ENSCJAG00000013288 I
KMT2A Cavia porcellus ENSCPOG00000005813 I
kmt2a Danio rerio ENSDARG00000004537 I
KMT2A Dasypus novemcinctus ENSDNOG00000011530 I
Kmt2a Dipodomys ordii ENSDORG00000007239 I
KMT2A Equus caballus ENSECAG00000007743 I
KMT2A Erinaceus europaeus ENSEEUG00000015428 I
KMT2A Echinops telfairi ENSETEG00000009695 I
KMT2A Homo sapiens ENSG00000118058 D
KMT2A Gorilla gorilla ENSGGOG00000000946 I
KMT2A Procavia capensis ENSPCAG00000005322 I
KMT2A Ochotona princeps ENSOPRG00000011275 I
KMT2A Otolemur garnettii ENSOGAG00000009345 I
KMT2A Anolis carolinensis ENSACAG00000007014 I
Kmt2a Mus musculus ENSMUSG00000002028 I
KMT2A Monodelphis domestica ENSMODG00000013474 I
KMT2A Macaca mulatta ENSMMUG00000005482 I
KMT2A Myotis lucifugus ENSMLUG00000014086 I
KMT2A Meleagris gallopavo ENSMGAG00000002737 I
KMT2A Loxodonta africana ENSLAFG00000014805 I
kmt2a Gasterosteus aculeatus ENSGACG00000009009 I
Myotis_brandtii_MLL_10033553 Myotis brandtii Myotis_brandtii_MLL_10033553 I
Ogr09611 Ophisaurus gracilis Ogr09611 I
Pvit_19329 Pogona vitticeps Pvit_19329 I
XP_002932944 Xenopus tropicalis XP_002932944 I
XP_002932945 Xenopus tropicalis XP_002932945 I