csin104466 (Clonorchis sinensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 csin104466 T308379_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.771 0.529
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.771 0.529
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.771 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin104466 Nuclear receptor 56 127

Links

Other Nuclear receptor family TFs
Other Clonorchis sinensis TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP12797 Atta cephalotes ACEP12797 I 0.793
ACEP13260 Atta cephalotes ACEP13260 I 0.754
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I 0.826
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I 0.826
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I 0.826
AGAP028221 Anopheles gambiae AGAP028221 I 0.808
ASU_12959 Ascaris suum ASU_12959 I 0.814
A_05482 Schistosoma haematobium A_05482 I 0.846
BGLB000955 Biomphalaria glabrata BGLB000955 N 0.819
Bm4091 Brugia malayi Bm4091 I 0.758
Bm5380 Brugia malayi Bm5380 I 0.758
Bm6295 Brugia malayi Bm6295 I 0.802
BTMF_0001157701 Brugia timori BTMF_0001157701 I 0.758
BXY_0995200 Bursaphelenchus xylophilus BXY_0995200 I 0.754
CapteG222512 Capitella teleta CapteG222512 I 0.745
CapteG224945 Capitella teleta CapteG224945 I 0.755
Cflo_03603--XP_001120531.1_APIME Camponotus floridanus Cflo_03603--XP_001120531.1_APIME I 0.793
CGI_10011509 Crassostrea gigas CGI_10011509 I 0.766
CGI_10023181 Crassostrea gigas CGI_10023181 I 0.747
CJA15590 Caenorhabditis japonica CJA15590 I 0.748
CLEC007515 Cimex lectularius CLEC007515 I 0.826
CLEC025065 Cimex lectularius CLEC025065 I 0.822
CRE01411 Caenorhabditis remanei CRE01411 I 0.795
CRE02779 Caenorhabditis remanei CRE02779 I 0.795
CRE05352 Caenorhabditis remanei CRE05352 I 0.795
CRE07013 Caenorhabditis remanei CRE07013 I 0.795
CRE08562 Caenorhabditis remanei CRE08562 I 0.795
CRE24369 Caenorhabditis remanei CRE24369 I 0.795
D918_00942 Trichuris suis D918_00942 I 0.772
D918_00971 Trichuris suis D918_00971 I 0.756
D918_09037 Trichuris suis D918_09037 I 0.778
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I 0.774
DILT_0000083601 Diphyllobothrium latum DILT_0000083601 N 0.977
EEL_0000298701 Elaeophora elaphi EEL_0000298701 I 0.762
EFV55278 Trichinella spiralis EFV55278 I 0.772
ENSAMXG00000019070 Astyanax mexicanus ENSAMXG00000019070 I 0.794
estExt_fgenesh2_pg.C_1200030 Branchiostoma floridae estExt_fgenesh2_pg.C_1200030 I 0.757
e_gw.243.31.1 Branchiostoma floridae e_gw.243.31.1 I 0.746
e_gw.243.32.1 Branchiostoma floridae e_gw.243.32.1 I 0.746
fgenesh2_pg.scaffold_569000002 Branchiostoma floridae fgenesh2_pg.scaffold_569000002 I 0.757
GB51231 Apis mellifera GB51231 I 0.793
GPUH_0001435501 Gongylonema pulchrum GPUH_0001435501 I 0.799
HDID_0000406601 Hymenolepis diminuta HDID_0000406601 I 0.874
HNAJ_0001369901 Hymenolepis nana HNAJ_0001369901 I 0.895
Hsal_02933--XP_001120662.1_APIME Harpegnathos saltator Hsal_02933--XP_001120662.1_APIME I 0.817
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I 0.793
KGM_21348 Danaus plexippus KGM_21348 I 0.808
L596_g17227 Steinernema carpocapsae L596_g17227 I 0.762
L596_g21437 Steinernema carpocapsae L596_g21437 I 0.783
L798_11128 Zootermopsis nevadensis L798_11128 I 0.826
L889_g22720 Steinernema feltiae L889_g22720 I 0.767
L889_g25609 Steinernema feltiae L889_g25609 I 0.783
L893_g17786 Steinernema glaseri L893_g17786 I 0.762
L898_g17470 Steinernema monticolum L898_g17470 I 0.745
L898_g30372 Steinernema monticolum L898_g30372 I 0.755
L898_g34308 Steinernema monticolum L898_g34308 I 0.783
LCUP004919 Lucilia cuprina LCUP004919 I 0.800
LOAG_16094 Loa loa LOAG_16094 I 0.762
LOAG_16177 Loa loa LOAG_16177 I 0.756
LOAG_17605 Loa loa LOAG_17605 I 0.756
LotgiG238472 Lottia gigantea LotgiG238472 I 0.769
MDOA002495 Musca domestica MDOA002495 I 0.800
MhA1_Contig91.frz3.fgene1 Meloidogyne hapla MhA1_Contig91.frz3.fgene1 I 0.758
nAv.1.0.1.g03788 Acanthocheilonema viteae nAv.1.0.1.g03788 I 0.779
nAv.1.0.1.g06142 Acanthocheilonema viteae nAv.1.0.1.g06142 I 0.762
nDi.2.2.2.g01542 Dirofilaria immitis nDi.2.2.2.g01542 I 0.802
nDi.2.2.2.g09623 Dirofilaria immitis nDi.2.2.2.g09623 I 0.753
nLs.2.1.2.g07781 Litomosoides sigmodontis nLs.2.1.2.g07781 I 0.762
nOo.2.0.1.g08685 Onchocerca ochengi nOo.2.0.1.g08685 I 0.802
Nr2f6 Mus musculus ENSMUSG00000002393 D 0.771
nRc.2.0.1.g05607 Romanomermis culicivorax nRc.2.0.1.g05607 I 0.824
nRc.2.0.1.g25218 Romanomermis culicivorax nRc.2.0.1.g25218 I 0.789
nRc.2.0.1.g46780 Romanomermis culicivorax nRc.2.0.1.g46780 I 0.754
NV16468 Nasonia vitripennis NV16468 I 0.793
PHUM468660 Pediculus humanus PHUM468660 I 0.795
PHUM470190 Pediculus humanus PHUM470190 I 0.754
PTRK_0000861500 Parastrongyloides trichosuri PTRK_0000861500 I 0.809
PTRK_0001566100 Parastrongyloides trichosuri PTRK_0001566100 I 0.763
rorc Danio rerio ENSDARG00000087195 I 0.794
RPRC003216 Rhodnius prolixus RPRC003216 I 0.826
RSKR_0000337300 Rhabditophanes kr3021 RSKR_0000337300 I 0.852
Sakowv30016840m.g Saccoglossus kowalevskii Sakowv30016840m.g I 0.751
SCUD_0002167301 Schistosoma curassoni SCUD_0002167301 N 0.914
SINV19432 Solenopsis invicta SINV19432 I 0.793
SMAR012614 Strigamia maritima SMAR012614 I 0.853
SMTD_0001266401 Schistosoma mattheei SMTD_0001266401 I 0.846
SMU15028943 Schmidtea mediterranea SMU15028943 I 0.749
SMUV_0001016301 Syphacia muris SMUV_0001016301 I 0.785
SPAL_0001238300 Strongyloides papillosus SPAL_0001238300 I 0.806
SPER_0001282801 Spirometra erinaceieuropaei SPER_0001282801 N 0.978
SPU_021289 Strongylocentrotus purpuratus SPU_021289 I 0.768
SPU_028255 Strongylocentrotus purpuratus SPU_028255 I 0.879
SROB_0001643701 Schistosoma rodhaini SROB_0001643701 N 0.804
SSLN_0000865601 Schistocephalus solidus SSLN_0000865601 N 0.977
SSTP_0001170800 Strongyloides stercoralis SSTP_0001170800 I 0.802
SVE_0697800 Strongyloides venezuelensis SVE_0697800 I 0.806
T265_13094 Opisthorchis viverrini T265_13094 I 0.990
TC003409 Tribolium castaneum TC003409 I 0.808
tetur34g00430 Tetranychus urticae tetur34g00430 I 0.813
TMUE_s0022010900 Trichuris muris TMUE_s0022010900 I 0.756
TMUE_s0091003400 Trichuris muris TMUE_s0091003400 I 0.810
TMUE_s0156001400 Trichuris muris TMUE_s0156001400 I 0.778
TRE_0000379501 Trichobilharzia regenti TRE_0000379501 I 0.846
TTRE_0000231701 Trichuris trichiura TTRE_0000231701 I 0.756
TTRE_0000500401 Trichuris trichiura TTRE_0000500401 I 0.772
WBGene00237160 Onchocerca volvulus WBGene00237160 I 0.823
WBGene00237162 Onchocerca volvulus WBGene00237162 I 0.823
WBGene00239805 Onchocerca volvulus WBGene00239805 I 0.802