CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin112656
(
Clonorchis sinensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
csin112656
T308393_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Smp_016180
M02411_2.00
Schistosoma mansoni
NGGACAYN
NRTGTCCN
PBM
Weirauch et al.(2014)
pTH5566
0.991
0.914
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin112656
Nuclear receptor
548
619
QRCQVCGELAAGFHHGAYVCEACKKFFMRHSLTDTKPTNICPTGGNCVVAKGSRGKCQICRYRKCLFVGMKM
Links
Other
Nuclear receptor
family TFs
Other
Clonorchis sinensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KGM_02386
Danaus plexippus
KGM_02386
N
MAL13P1.290
Plasmodium falciparum
MAL13P1.290
N
PCHAS_113500
Plasmodium chabaudi
PCHAS_113500
N
PKH_111160
Plasmodium knowlesi
PKH_111160
N
PVX_114930
Plasmodium vivax
PVX_114930
N