L893_g25227 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g25227 T309355_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.989 0.757
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.960 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g25227.t1 Nuclear receptor 31 100

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28308.m000066 Ricinus communis 28308.m000066 N
Bostr.23794s0250 Boechera stricta Bostr.23794s0250 N
cassava3830.m1 Manihot esculenta cassava3830.m1 N
Ca_17704 Cicer arietinum Ca_17704 N
Eucgr.A00520 Eucalyptus grandis Eucgr.A00520 N
GLYMA01G29760 Glycine max GLYMA01G29760 N
GLYMA03G07590 Glycine max GLYMA03G07590 N
GLYMA07G18320 Glycine max GLYMA07G18320 N
GLYMA18G43190 Glycine max GLYMA18G43190 N
LjSGA_009825.1 Lotus japonicus LjSGA_009825.1 N
mgf020472m Mimulus guttatus mgf020472m N