L898_g20180 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g20180 T309457_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.809 0.552
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g20180.t1 Nuclear receptor 15 82

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29912.m005354 Ricinus communis 29912.m005354 I
anac075 Arabidopsis thaliana AT4G29230 D
anac075 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7001013 I
Aquca_001_00211 Aquilegia coerulea Aquca_001_00211 I
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I
BGIOSGA002220 Oryza indica BGIOSGA002220 I
BGIOSGA020356 Oryza indica BGIOSGA020356 I
Bo1g016630 Brassica oleracea Bo1g016630 I
Bo7g113660 Brassica oleracea Bo7g113660 I
Bostr.7867s0767 Boechera stricta Bostr.7867s0767 I
Bra011090 Brassica rapa Bra011090 I
Bra024152 Brassica rapa Bra024152 I
BRADI2G46197 Brachypodium distachyon BRADI2G46197 I
Cagra.0495s0057 Capsella grandiflora Cagra.0495s0057 I
Carubv10004602m.g Capsella rubella Carubv10004602m.g I
cassava11584.m1 Manihot esculenta cassava11584.m1 I
cassava44586.m1 Manihot esculenta cassava44586.m1 I
cassava46566.m1 Manihot esculenta cassava46566.m1 I
Ca_05913 Cicer arietinum Ca_05913 I
Ciclev10010579m.g Citrus clementina Ciclev10010579m.g I
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I
Cla000384 Citrullus lanatus Cla000384 N
Cla011431 Citrullus lanatus Cla011431 I
Cla017075 Citrullus lanatus Cla017075 I
Cucsa.087480 Cucumis sativus Cucsa.087480 N
Cucsa.116800 Cucumis sativus Cucsa.116800 I
Cucsa.288680 Cucumis sativus Cucsa.288680 I
Eucgr.C00958 Eucalyptus grandis Eucgr.C00958 I
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I
evm.TU.supercontig_78.40 Carica papaya evm.TU.supercontig_78.40 I
gene11344-v1.0-hybrid Fragaria vesca gene11344-v1.0-hybrid I
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I
GLYMA01G00880 Glycine max GLYMA01G00880 I
GLYMA07G32250 Glycine max GLYMA07G32250 I
GLYMA08G03590 Glycine max GLYMA08G03590 I
GLYMA12G13710 Glycine max GLYMA12G13710 I
GLYMA13G24320 Glycine max GLYMA13G24320 I
Gorai.009G028900 Gossypium raimondii Gorai.009G028900 I
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I
LPERR01G05530 Leersia perrieri LPERR01G05530 I
LPERR05G21400 Leersia perrieri LPERR05G21400 I
Lus10012927.g Linum usitatissimum Lus10012927.g N
Lus10034999.g Linum usitatissimum Lus10034999.g N
MDP0000124509 Malus domestica MDP0000124509 I
MDP0000276278 Malus domestica MDP0000276278 I
MDP0000309351 Malus domestica MDP0000309351 I
mgf019352m Mimulus guttatus mgf019352m N
MTR_4g088245 Medicago truncatula MTR_4g088245 I
MTR_8g069160 Medicago truncatula MTR_8g069160 I
MTR_8g102240 Medicago truncatula MTR_8g102240 I
OB01G15780 Oryza brachyantha OB01G15780 I
OB05G33280 Oryza brachyantha OB05G33280 I
OB06G26080 Oryza brachyantha OB06G26080 N
OBART01G05840 Oryza barthii OBART01G05840 I
OBART05G25770 Oryza barthii OBART05G25770 I
OGLUM01G06390 Oryza glumaepatula OGLUM01G06390 I
OGLUM05G27400 Oryza glumaepatula OGLUM05G27400 I
OLONG_008708 Oryza longistaminata OLONG_008708 I
ONIVA01G06690 Oryza nivara ONIVA01G06690 I
ONIVA05G27670 Oryza nivara ONIVA05G27670 I
OPUNC01G05680 Oryza punctata OPUNC01G05680 I
OPUNC05G23360 Oryza punctata OPUNC05G23360 I
orange1.1g012118m.g Citrus sinensis orange1.1g012118m.g I
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I
ORGLA01G0055000 Oryza glaberrima ORGLA01G0055000 I
ORGLA05G0222500 Oryza glaberrima ORGLA05G0222500 I
ORUFI01G06380 Oryza rufipogon ORUFI01G06380 I
ORUFI05G27670 Oryza rufipogon ORUFI05G27670 I
OS01G0191300 Oryza sativa OS01G0191300 I
OS05G0563000 Oryza sativa OS05G0563000 I
Pavir.J05241 Panicum virgatum Pavir.J05241 I
PK27085.1 Cannabis sativa PK27085.1 D
PK28347.1 Cannabis sativa PK28347.1 I
Pm010104 Prunus mume Pm010104 I
Pm027280 Prunus mume Pm027280 I
POPTR_0006s15740 Populus trichocarpa POPTR_0006s15740 I
POPTR_0018s06790 Populus trichocarpa POPTR_0018s06790 I
PRUPE_ppa004775mg Prunus persica PRUPE_ppa004775mg I
PRUPE_ppa008828mg Prunus persica PRUPE_ppa008828mg I
SapurV1A.0212s0190 Salix purpurea SapurV1A.0212s0190 I
SapurV1A.1259s0030 Salix purpurea SapurV1A.1259s0030 I
Sb03g030750 Sorghum bicolor Sb03g030750 I
Si002301m.g Setaria italica Si002301m.g I
TCM_029798 Theobroma cacao TCM_029798 I
TCM_037747 Theobroma cacao TCM_037747 I
Thhalv10024980m.g Eutrema salsugineum Thhalv10024980m.g I
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I
Traes_3AL_41AC2099E Triticum aestivum Traes_3AL_41AC2099E I
Traes_3AL_41AC2099E1 Triticum aestivum Traes_3AL_41AC2099E1 I
Traes_3DL_C686CE2E3 Triticum aestivum Traes_3DL_C686CE2E3 I
TRIUR3_27393 Triticum urartu TRIUR3_27393 I
TRIUR3_33147 Triticum urartu TRIUR3_33147 I
VIT_11s0016g02880 Vitis vinifera VIT_11s0016g02880 I