CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf00536-augustus-gene-0.6
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf00536-augustus-gene-0.6
T309549_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf00536-augustus-gene-0.6-mRNA-1
Nuclear receptor
11
78
LCCEICGKQSESRNYNVVSCPSCKQFFRRTVLYQKVVNCKRNKKCDIINGDKCRGCRFDKCLIEGMDP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL009092
Aedes aegypti
AAEL009092
N
AAL89720
Xenopus laevis
AAL89720
N
Alligator_sinensis_CCG000180.1
Alligator sinensis
Alligator_sinensis_CCG000180.1
N
Alligator_sinensis_CCG004678.1
Alligator sinensis
Alligator_sinensis_CCG004678.1
N
cers2a
Tetraodon nigroviridis
ENSTNIG00000017545
N
cers3.L
Xenopus laevis
XB-GENE-6251639
N
cers3b
Danio rerio
ENSDARG00000036337
N
cers4b
Takifugu rubripes
ENSTRUG00000000191
N
CERS5
Takifugu rubripes
ENSTRUG00000010435
N
CERS5
Tetraodon nigroviridis
ENSTNIG00000017897
N
CERS5
Oryzias latipes
ENSORLG00000010219
N
cers5.S
Xenopus laevis
XB-GENE-866438
N
Cmyd_10017930
Chelonia mydas
Cmyd_10017930
N
ENSAMXG00000012483
Astyanax mexicanus
ENSAMXG00000012483
N
ENSCSAVG00000011823
Ciona savignyi
ENSCSAVG00000011823
N
ENSGACG00000002760
Gasterosteus aculeatus
ENSGACG00000002760
N
ENSGMOG00000018099
Gadus morhua
ENSGMOG00000018099
N
ENSLOCG00000004390
Lepisosteus oculatus
ENSLOCG00000004390
N
ENSMGAG00000017003
Meleagris gallopavo
ENSMGAG00000017003
N
ENSMICG00000014767
Microcebus murinus
ENSMICG00000014767
N
ENSMICG00000017321
Microcebus murinus
ENSMICG00000017321
N
ENSMODG00000004533
Monodelphis domestica
ENSMODG00000004533
N
ENSOARG00000017904
Ovis aries
ENSOARG00000017904
N
ENSONIG00000017329
Oreochromis niloticus
ENSONIG00000017329
N
ENSONIG00000019701
Oreochromis niloticus
ENSONIG00000019701
N
ENSPFOG00000013551
Poecilia formosa
ENSPFOG00000013551
N
ENSPMAG00000008848
Petromyzon marinus
ENSPMAG00000008848
N
ENSSHAG00000001540
Sarcophilus harrisii
ENSSHAG00000001540
N
ENSSHAG00000001747
Sarcophilus harrisii
ENSSHAG00000001747
N
ENSSHAG00000003870
Sarcophilus harrisii
ENSSHAG00000003870
N
ENSXMAG00000010322
Xiphophorus maculatus
ENSXMAG00000010322
N
estExt_gwp.C_860189
Branchiostoma floridae
estExt_gwp.C_860189
N
e_gw.479.83.1
Branchiostoma floridae
e_gw.479.83.1
N
HelroG82517
Helobdella robusta
HelroG82517
N
KGM_16996
Danaus plexippus
KGM_16996
N
L798_00373
Zootermopsis nevadensis
L798_00373
N
LDEC003623
Leptinotarsa decemlineata
LDEC003623
N
LotgiG226091
Lottia gigantea
LotgiG226091
N
MCINX005367
Melitaea cinxia
MCINX005367
N
Myotis_brandtii_Lass6_10034918
Myotis brandtii
Myotis_brandtii_Lass6_10034918
N
Ocbimv22016239m.g
Octopus bimaculoides
Ocbimv22016239m.g
N
RPRC008736
Rhodnius prolixus
RPRC008736
N
SINV24013
Solenopsis invicta
SINV24013
N