CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g02923
(
Acanthocheilonema viteae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
nAv.1.0.1.g02923
T309689_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.867
0.614
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t02923-RA
Nuclear receptor
90
159
TLCVVCSDLASGIHYSVASCNGCKTFFRRALVNKQAFQCQFSDDCIVDKSVRCGCRSCRLKKCFEMGMDP
Links
Other
Nuclear receptor
family TFs
Other
Acanthocheilonema viteae
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL004097
Aedes aegypti
AAEL004097
N
AALB009972
Anopheles albimanus
AALB009972
N
AARA003420
Anopheles arabiensis
AARA003420
N
AATE003836
Anopheles atroparvus
AATE003836
N
ACEP15313
Atta cephalotes
ACEP15313
N
ACEP15314
Atta cephalotes
ACEP15314
N
ACEP15330
Atta cephalotes
ACEP15330
N
ACHR005166
Anopheles christyi
ACHR005166
N
ACOM026226
Anopheles coluzzii
ACOM026226
N
ACUA018116
Anopheles culicifacies
ACUA018116
N
ACYPI003697
Acyrthosiphon pisum
ACYPI003697
N
ADAC001260
Anopheles darlingi
ADAC001260
N
ADIR000502
Anopheles dirus
ADIR000502
N
AFAF001212
Anopheles farauti
AFAF001212
N
AFUN009606
Anopheles funestus
AFUN009606
N
AGAP012342
Anopheles gambiae
AGAP012342
N
AMAM003031
Anopheles maculatus
AMAM003031
N
AMEC021898
Anopheles melas
AMEC021898
N
AMEM007635
Anopheles merus
AMEM007635
N
AMIN009356
Anopheles minimus
AMIN009356
N
AQUA002997
Anopheles quadriannulatus
AQUA002997
N
BGIBMGA008915
Bombyx mori
BGIBMGA008915
N
BGIBMGA008965
Bombyx mori
BGIBMGA008965
N
Cflo_06471--XP_001120327.1_APIME
Camponotus floridanus
Cflo_06471--XP_001120327.1_APIME
N
Cflo_09321--XP_393312.1_APIME
Camponotus floridanus
Cflo_09321--XP_393312.1_APIME
N
Cflo_12495--XP_001120327.1_APIME
Camponotus floridanus
Cflo_12495--XP_001120327.1_APIME
N
CLEC002260
Cimex lectularius
CLEC002260
N
CLEC002262
Cimex lectularius
CLEC002262
N
CPIJ003409
Culex quinquefasciatus
CPIJ003409
N
CpipJ_CPIJ003409
Culex pipiens
CpipJ_CPIJ003409
N
DAPPUDRAFT_299514
Daphnia pulex
DAPPUDRAFT_299514
N
DAPPUDRAFT_64307
Daphnia pulex
DAPPUDRAFT_64307
N
GB43778
Apis mellifera
GB43778
N
GB43788
Apis mellifera
GB43788
N
HHAL003217-PA
Halyomorpha halys
HHAL003217-PA
N
HMEL008302
Heliconius melpomene
HMEL008302
N
HMEL013921
Heliconius melpomene
HMEL013921
N
Hsal_08372--XP_393312.1_APIME
Harpegnathos saltator
Hsal_08372--XP_393312.1_APIME
N
Hsal_08385--XP_001120327.1_APIME
Harpegnathos saltator
Hsal_08385--XP_001120327.1_APIME
N
KGM_04455
Danaus plexippus
KGM_04455
N
KGM_14329
Danaus plexippus
KGM_14329
N
L798_10924
Zootermopsis nevadensis
L798_10924
I
L798_10927
Zootermopsis nevadensis
L798_10927
N
L798_10928
Zootermopsis nevadensis
L798_10928
I
LDEC006635
Leptinotarsa decemlineata
LDEC006635
N
LDEC006636
Leptinotarsa decemlineata
LDEC006636
N
LDEC015408
Leptinotarsa decemlineata
LDEC015408
N
LLOJ005066
Lutzomyia longipalpis
LLOJ005066
N
LLOJ009833
Lutzomyia longipalpis
LLOJ009833
N
MCINX007973
Melitaea cinxia
MCINX007973
N
PHUM375920
Pediculus humanus
PHUM375920
N
PHUM375930
Pediculus humanus
PHUM375930
N
PPAI000981
Phlebotomus papatasi
PPAI000981
N
RPRC006229
Rhodnius prolixus
RPRC006229
N
SINV15880
Solenopsis invicta
SINV15880
N
SINV15898
Solenopsis invicta
SINV15898
N
TC005541
Tribolium castaneum
TC005541
N
TC006580
Tribolium castaneum
TC006580
N
YQE_12730
Dendroctonus ponderosae
YQE_12730
N
YQE_12733
Dendroctonus ponderosae
YQE_12733
N