CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tp63
(
Oryzias latipes
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSORLG00000015665
T311116_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.959
0.959
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.847
0.847
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.847
0.847
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.847
0.847
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.847
0.847
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.847
0.847
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.847
0.847
TP73
M11196_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.847
0.847
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000019616
p53
146
342
PAIPSNTDYAGPHSFDVSFQQSSTAKSATWTYSTDLKKLYCQIAKTCPIQIKVLTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNDGQIAPPSHLIRVEGNNHAQYLEDSITGRQSVLVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSI
ENSORLP00000019617
p53
68
264
PAIPSNTDYAGPHSFDVSFQQSSTAKSATWTYSTDLKKLYCQIAKTCPIQIKVLTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNDGQIAPPSHLIRVEGNNHAQYLEDSITGRQSVLVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSI
ENSORLP00000019618
p53
68
264
PAIPSNTDYAGPHSFDVSFQQSSTAKSATWTYSTDLKKLYCQIAKTCPIQIKVLTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNDGQIAPPSHLIRVEGNNHAQYLEDSITGRQSVLVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSI
ENSORLP00000019620
p53
68
264
PAIPSNTDYAGPHSFDVSFQQSSTAKSATWTYSTDLKKLYCQIAKTCPIQIKVLTPPPQGAVIRAMPVYKKAEHVTEVVKRCPNHELSREFNDGQIAPPSHLIRVEGNNHAQYLEDSITGRQSVLVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSI
Links
Other
p53
family TFs
Other
Oryzias latipes
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_00440
Capronia coronata
A1O1_00440
I
0.000
A1O5_03789
Cladophialophora psammophila
A1O5_03789
I
0.000
A1O7_00422
Cladophialophora yegresii
A1O7_00422
I
0.000
A1O9_01459
Exophiala aquamarina
A1O9_01459
I
0.000
ARB_05017
Arthroderma benhamiae
ARB_05017
I
0.000
BAUCODRAFT_119725
Baudoinia compniacensis
BAUCODRAFT_119725
I
0.000
Bcin01g06300
Botrytis cinerea
Bcin01g06300
I
0.000
BGHDH14_bgh02178
Blumeria graminis
BGHDH14_bgh02178
I
0.000
CFIO01_12884
Colletotrichum fioriniae
CFIO01_12884
I
0.000
CGGC5_6423
Colletotrichum gloeosporioides
CGGC5_6423
I
0.000
CH063_10875
Colletotrichum higginsianum
CH063_10875
I
0.000
CHGG_05934
Chaetomium globosum
CHGG_05934
I
0.000
CIMG_01041
Coccidioides immitis
CIMG_01041
I
0.000
Cob_08038
Colletotrichum orbiculare
Cob_08038
I
0.000
COCC4DRAFT_62452
Bipolaris maydis
COCC4DRAFT_62452
I
0.000
COCCADRAFT_21472
Bipolaris zeicola
COCCADRAFT_21472
I
0.000
COCMIDRAFT_23818
Bipolaris oryzae
COCMIDRAFT_23818
I
0.000
COCSADRAFT_276273
Bipolaris sorokiniana
COCSADRAFT_276273
I
0.000
COCVIDRAFT_38721
Bipolaris victoriae
COCVIDRAFT_38721
I
0.000
CPC735_053190
Coccidioides posadasii
CPC735_053190
I
0.000
CSUB01_11791
Colletotrichum sublineola
CSUB01_11791
I
0.000
DOTSEDRAFT_74982
Dothistroma septosporum
DOTSEDRAFT_74982
I
0.000
estExt_fgenesh1_pg.C_50728
Cryphonectria parasitica
estExt_fgenesh1_pg.C_50728
I
0.000
estExt_Genewise1Plus.C_100794
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_100794
I
0.000
estExt_Genewise1Plus.C_380118
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_380118
I
0.000
e_gw1.11.537.1
Mycosphaerella graminicola
e_gw1.11.537.1
I
0.000
F503_02611
Ophiostoma piceae uamh
F503_02611
I
0.000
G647_00459
Cladophialophora carrionii
G647_00459
I
0.000
GGTG_01991
Gaeumannomyces graminis
GGTG_01991
I
0.000
GLRG_04444
Colletotrichum graminicola
GLRG_04444
I
0.000
GMDG_04728
Pseudogymnoascus destructans
GMDG_04728
I
0.000
H101_00763
Trichophyton interdigitale
H101_00763
I
0.000
H102_05578
Trichophyton rubrum
H102_05578
I
0.000
H105_05619
Trichophyton soudanense
H105_05619
I
0.000
HCBG_00900
Histoplasma capsulatum
HCBG_00900
D
0.000
HMPREF1120_06024
Exophiala dermatitidis
HMPREF1120_06024
I
0.000
HMPREF1541_05909
Cyphellophora europaea
HMPREF1541_05909
I
0.000
LEMA_P095280.1
Leptosphaeria maculans
LEMA_P095280.1
I
0.000
M437DRAFT_14468
Aureobasidium melanogenum
M437DRAFT_14468
I
0.000
M438DRAFT_31288
Aureobasidium pullulans
M438DRAFT_31288
I
0.000
MAPG_06349
Magnaporthe poae
MAPG_06349
I
0.000
MBM_02592
Marssonina brunnea
MBM_02592
I
0.000
MCYG_04721
Microsporum canis
MCYG_04721
I
0.000
MCYG_04721
Arthroderma otae
MCYG_04721
I
0.000
MGG_04729
Magnaporthe oryzae
MGG_04729
I
0.000
MGYG_02055
Microsporum gypseum
MGYG_02055
I
0.000
MYCFIDRAFT_60981
Pseudocercospora fijiensis
MYCFIDRAFT_60981
I
0.000
Mycgr3G49965
Zymoseptoria tritici
Mycgr3G49965
I
0.000
MYCTH_77476
Myceliophthora thermophila
MYCTH_77476
I
0.000
OIDMADRAFT_117495
Oidiodendron maius
OIDMADRAFT_117495
I
0.000
PAAG_01064
Paracoccidioides sp lutzii
PAAG_01064
I
0.000
PABG_01647
Paracoccidioides brasiliensis
PABG_01647
I
0.000
PFICI_02022
Pestalotiopsis fici
PFICI_02022
I
0.000
PTT_18239
Pyrenophora teres
PTT_18239
I
0.000
PV04_01647
Capronia semiimmersa
PV04_01647
I
0.000
PV05_11407
Exophiala xenobiotica
PV05_11407
I
0.000
PV06_03201
Exophiala oligosperma
PV06_03201
I
0.000
PV07_10272
Cladophialophora immunda
PV07_10272
I
0.000
PV08_05635
Exophiala spinifera
PV08_05635
I
0.000
PV10_06256
Exophiala mesophila
PV10_06256
I
0.000
PV11_07704
Exophiala sideris
PV11_07704
I
0.000
SAPIO_CDS3166
Scedosporium apiospermum
SAPIO_CDS3166
I
0.000
SBOR_1325
Sclerotinia borealis
SBOR_1325
I
0.000
SEPMUDRAFT_52418
Sphaerulina musiva
SEPMUDRAFT_52418
I
0.000
SETTUDRAFT_103803
Setosphaeria turcica
SETTUDRAFT_103803
I
0.000
TEQG_02506
Trichophyton equinum
TEQG_02506
I
0.000
TESG_02848
Trichophyton tonsurans
TESG_02848
I
0.000
THITE_2112431
Thielavia terrestris
THITE_2112431
I
0.000
TRV_02633
Trichophyton verrucosum
TRV_02633
I
0.000
UCREL1_7924
Eutypa lata
UCREL1_7924
I
0.000
UCRPA7_6713
Togninia minima
UCRPA7_6713
I
0.000
V499_08165
Pseudogymnoascus pannorum
V499_08165
I
0.000
Z517_08474
Fonsecaea pedrosoi
Z517_08474
I
0.000
Z518_03932
Rhinocladiella mackenziei
Z518_03932
I
0.000
Z519_03111
Cladophialophora bantiana
Z519_03111
I
0.000