CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000029194
(
Ictidomys tridecemlineatus
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSSTOG00000029194
T311155_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.980
0.980
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.980
0.980
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.980
0.980
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.980
0.980
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.980
0.980
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.980
0.980
TP73
M11196_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.980
0.980
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.857
0.857
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000022492
p53
60
256
PVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAVRAMPVYKKAEHVTDIVKRCPNHELGRDFNEGQSAPASHLIRVEGNSLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLETRDGQVLGRRSFEGRICACPGRDRKADEDHY
Links
Other
p53
family TFs
Other
Ictidomys tridecemlineatus
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002049
Aedes aegypti
AAEL002049
N
AALB005830
Anopheles albimanus
AALB005830
N
AATE014920
Anopheles atroparvus
AATE014920
N
ACHR008375
Anopheles christyi
ACHR008375
N
ACOM038868
Anopheles coluzzii
ACOM038868
N
ACUA002672
Anopheles culicifacies
ACUA002672
N
ACYPI004686
Acyrthosiphon pisum
ACYPI004686
N
ADAC003147
Anopheles darlingi
ADAC003147
N
ADIR006896
Anopheles dirus
ADIR006896
N
AEPI006442
Anopheles epiroticus
AEPI006442
N
AFAF013492
Anopheles farauti
AFAF013492
N
AFUN004883
Anopheles funestus
AFUN004883
N
AGAP012873
Anopheles gambiae
AGAP012873
N
AMEC018494
Anopheles melas
AMEC018494
N
AMEM006050
Anopheles merus
AMEM006050
N
AMIN010178
Anopheles minimus
AMIN010178
N
AQUA011207
Anopheles quadriannulatus
AQUA011207
N
ASIS018029
Anopheles sinensis
ASIS018029
N
ASTEI02247
Anopheles stephensi
ASTEI02247
N
Cflo_03663--XP_001121441.1_APIME
Camponotus floridanus
Cflo_03663--XP_001121441.1_APIME
N
CLEC000189
Cimex lectularius
CLEC000189
N
CPIJ014938
Culex quinquefasciatus
CPIJ014938
N
CpipJ_CPIJ014938
Culex pipiens
CpipJ_CPIJ014938
N
CYC
Anopheles gambiae
AGAP005655
N
DAPPUDRAFT_346995
Daphnia pulex
DAPPUDRAFT_346995
N
GA21284
Drosophila pseudoobscura
FBgn0081272
N
GB43953
Apis mellifera
GB43953
N
GF10846
Drosophila ananassae
FBgn0087886
N
GH16911
Drosophila grimshawi
FBgn0124382
N
GJ14003
Drosophila virilis
FBgn0201221
N
GK17217
Drosophila willistoni
FBgn0219216
N
GL15678
Drosophila persimilis
FBgn0153282
N
HMEL011026
Heliconius melpomene
HMEL011026
N
Hsal_04208--XP_001121441.1_APIME
Harpegnathos saltator
Hsal_04208--XP_001121441.1_APIME
N
L798_13398
Zootermopsis nevadensis
L798_13398
N
LCUP007672
Lucilia cuprina
LCUP007672
N
LDEC004019
Leptinotarsa decemlineata
LDEC004019
N
MDOA007541
Musca domestica
MDOA007541
N
NEMVEDRAFT_v1g132249
Nematostella vectensis
NEMVEDRAFT_v1g132249
I
NEMVEDRAFT_v1g224692
Nematostella vectensis
NEMVEDRAFT_v1g224692
I
NV13263
Nasonia vitripennis
NV13263
N
PHUM580780
Pediculus humanus
PHUM580780
N
PPAI010392
Phlebotomus papatasi
PPAI010392
N
RPRC000556
Rhodnius prolixus
RPRC000556
N
SINV21276
Solenopsis invicta
SINV21276
N
TC002494
Tribolium castaneum
TC002494
N
YQE_03758
Dendroctonus ponderosae
YQE_03758
N