CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tp63
(
Tetraodon nigroviridis
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSTNIG00000013774
T311162_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.944
0.944
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.842
0.842
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.842
0.842
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.842
0.842
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.842
0.842
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.842
0.842
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.842
0.842
TP73
M11196_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.842
0.842
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000016776
p53
147
343
PAIPSNTDYAGPHTFDVSFQQSSTAKSATWTYSTDLKKLYCQIAKTCPIQIKVLTTPPQGAVVRAMPVYKKAEHVTEVVKRCPNHELSREFNDGQMAPPSHLIRVEGNNHAQYVEDTITGRQSVLVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKADEDSI
Links
Other
p53
family TFs
Other
Tetraodon nigroviridis
TFs
122 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03114
Capronia coronata
A1O1_03114
I
A1O3_01974
Capronia epimyces
A1O3_01974
I
A1O5_03439
Cladophialophora psammophila
A1O5_03439
I
A1O7_04367
Cladophialophora yegresii
A1O7_04367
I
A1O9_00612
Exophiala aquamarina
A1O9_00612
I
ACLA_039140
Aspergillus clavatus
CADACLAG00003633
N
AFUA_3G11250
Aspergillus fumigatus
CADAFUAG00005698
I
ANIA_04873
Aspergillus nidulans
CADANIAG00005532
I
ARB_05394
Arthroderma benhamiae
ARB_05394
N
ATEG_04658
Aspergillus terreus
CADATEAG00009335
I
BAUCODRAFT_499054
Baudoinia compniacensis
BAUCODRAFT_499054
N
Bcin02g07540
Botrytis cinerea
Bcin02g07540
I
CADAFLAG00002515
Aspergillus flavus
CADAFLAG00002515
I
CADANGAG00002216
Aspergillus niger
CADANGAG00002216
I
CADAORAG00001279
Aspergillus oryzae
CADAORAG00001279
I
CIMG_03820
Coccidioides immitis
CIMG_03820
N
CPC735_005020
Coccidioides posadasii
CPC735_005020
N
CPUR_04347
Claviceps purpurea
CPUR_04347
I
CTHT_0018750
Chaetomium thermophilum
CTHT_0018750
I
EPUS_07921
Endocarpon pusillum
EPUS_07921
I
EURHEDRAFT_515807
Aspergillus ruber
EURHEDRAFT_515807
I
EV44_g6127
Erysiphe necator
EV44_g6127
I
e_gw1.00866.172.1
Aspergillus carbonarius
e_gw1.00866.172.1
I
G647_04328
Cladophialophora carrionii
G647_04328
I
GSTUM_00007462001
Tuber melanosporum
GSTUM_00007462001
I
H101_04757
Trichophyton interdigitale
H101_04757
N
H102_07608
Trichophyton rubrum
H102_07608
N
H105_07634
Trichophyton soudanense
H105_07634
N
HMPREF1120_06603
Exophiala dermatitidis
HMPREF1120_06603
I
HMPREF1541_09309
Cyphellophora europaea
HMPREF1541_09309
I
MCYG_00678
Microsporum canis
MCYG_00678
N
MCYG_00678
Arthroderma otae
MCYG_00678
N
MGYG_01294
Microsporum gypseum
MGYG_01294
N
NFIA_066040
Neosartorya fischeri
CADNFIAG00006379
I
OIDMADRAFT_103771
Oidiodendron maius
OIDMADRAFT_103771
I
Pc13g09500
Penicillium chrysogenum
Pc13g09500
N
PCH_Pc13g09500
Penicillium rubens
PCH_Pc13g09500
N
PDIP_29800
Penicillium digitatum
PDIP_29800
N
PEX1_090700
Penicillium expansum
PEX1_090700
N
PITC_062120
Penicillium italicum
PITC_062120
N
PMAA_023500
Penicillium marneffei
PMAA_023500
N
PMAA_023500
Talaromyces marneffei
PMAA_023500
N
PV04_04915
Capronia semiimmersa
PV04_04915
I
PV05_09372
Exophiala xenobiotica
PV05_09372
I
PV06_04279
Exophiala oligosperma
PV06_04279
I
PV07_07651
Cladophialophora immunda
PV07_07651
I
PV08_10349
Exophiala spinifera
PV08_10349
I
PV10_00143
Exophiala mesophila
PV10_00143
I
PV11_04194
Exophiala sideris
PV11_04194
I
PVAR5_7714
Byssochlamys spectabilis
PVAR5_7714
I
SBOR_8019
Sclerotinia borealis
SBOR_8019
I
TEQG_05544
Trichophyton equinum
TEQG_05544
N
TESG_05703
Trichophyton tonsurans
TESG_05703
N
TRV_03376
Trichophyton verrucosum
TRV_03376
N
U727_00433320351
Penicillium solitum
U727_00433320351
N
Z517_12080
Fonsecaea pedrosoi
Z517_12080
I
Z518_09813
Rhinocladiella mackenziei
Z518_09813
I
Z519_10261
Cladophialophora bantiana
Z519_10261
I