Aan_R005960 (Calypte anna)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00870 (P53) IPR011615 Aan_R005960 T311219_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TP73
M08035_2.00 		Homo sapiens
RCADGYHSDGRCWDG
CHWGYCHSDRCHTGY		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin 		0.974 0.974
TP73
M08036_2.00 		Homo sapiens
DRRCAWGYHCWGRCWTGYH
DRCAWGYCWGDRCWTGYYH		 ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle 		0.974 0.974
TP73
M08037_2.00 		Homo sapiens
RCMDGYBCHNDCHKG
CMDGHNDGVRCHKGY		 ChIP-seq
Chen et al.(2011)
GSE18650_TP73 		0.974 0.974
TP73
M09336_2.00 		Homo sapiens
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A 		0.974 0.974
TP73
M11196_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P73_Q6 		0.974 0.974
Trp73
M03438_2.00 		Mus musculus
DRCAWGTYNNRACAYGYH
DRCRTGTYNNRACWTGYH		 SELEX
Jolma et al.(2013)
Tp73_1 		0.964 0.964
Trp73
M09339_2.00 		Mus musculus
NDDCHWGYYCMRRCHTGYH
DRCADGYYKGRRCWDGHHN		 Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B 		0.964 0.964
Trp63
M09338_2.00 		Mus musculus
DRCAWGYHCHRRCHTGYHN
NDRCADGYYDGDRCWTGYH		 Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B 		0.862 0.862
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R005960 p53 115 311

Links

Other p53 family TFs
Other Calypte anna TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action