CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Myotis_brandtii_Ccdc27_10023983 *(Myotis brandtii)* p53
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00870 (P53)	IPR011615	Myotis_brandtii_Ccdc27_10023983	T311241_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TP73 M08035_2.00	Homo sapiens	RCADGYHSDGRCWDG	CHWGYCHSDRCHTGY	ChIP-seq Chen et al.(2011) GSE15704_TP73_rapamycin	0.895	0.895
TP73 M08036_2.00	Homo sapiens	DRRCAWGYHCWGRCWTGYH	DRCAWGYCWGDRCWTGYYH	ChIP-seq Chen et al.(2011) GSE15704_TP73_vehicle	0.895	0.895
TP73 M08037_2.00	Homo sapiens	RCMDGYBCHNDCHKG	CMDGHNDGVRCHKGY	ChIP-seq Chen et al.(2011) GSE18650_TP73	0.895	0.895
TP73 M09336_2.00	Homo sapiens	NDDCHWGYYCMRRCHTGYH	DRCADGYYKGRRCWDGHHN	Misc Kulakovskiy et al.(2013) P73_HUMAN.H11MO.0.A	0.895	0.895
TP73 M11196_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$P73_Q6	0.895	0.895
Trp73 M03438_2.00	Mus musculus	DRCAWGTYNNRACAYGYH	DRCRTGTYNNRACWTGYH	SELEX Jolma et al.(2013) Tp73_1	0.886	0.886
Trp73 M09339_2.00	Mus musculus	NDDCHWGYYCMRRCHTGYH	DRCADGYYKGRRCWDGHHN	Misc Kulakovskiy et al.(2013) P73_MOUSE.H11MO.0.B	0.886	0.886
Trp63 M09338_2.00	Mus musculus	DRCAWGYHCHRRCHTGYHN	NDRCADGYYDGDRCWTGYH	Misc Kulakovskiy et al.(2013) P63_MOUSE.H11MO.0.B	0.825	0.825
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Myotis_brandtii_Ccdc27_10023983	p53	1	117	MPVYKKAEHVTEVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVEDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILVIITLENRDFLTGLGCPNCIER

Links
Other p53 family TFs
Other *Myotis brandtii* TFs

11 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Cmyd_10015921	Chelonia mydas	Cmyd_10015921	I	0.886
ENSONIG00000002106	Oreochromis niloticus	ENSONIG00000002106	I	0.860
ENSPFOG00000010828	Poecilia formosa	ENSPFOG00000010828	I	0.842
TP63	Callithrix jacchus	ENSCJAG00000014256	I	0.825
tp63	Danio rerio	ENSDARG00000044356	I	0.816
TP63	Homo sapiens	ENSG00000073282	D	0.825
TP63	Macaca mulatta	ENSMMUG00000016466	I	0.825
tp63	Xenopus tropicalis	XB-GENE-479868	I	0.816
TP73	Erinaceus europaeus	ENSEEUG00000013128	I	0.895
TP73	Gallus gallus	ENSGALG00000001006	I	0.868
Trp73	Mus musculus	ENSMUSG00000029026	D	0.886