CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00505500
(
Haemonchus contortus
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00870 (P53)
IPR011615
HCOI00505500
T311343_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00505500.t1
p53
9
176
QTKSSKNLDYVVMRNKCGMTLYSKSELMVPFVFSTSNNCEPNSMIRVHAEYTEERYANKPVERCPNHQYKDTLAATANIRQHFVRCEHVGAEYVEKDGGYFVRIPMCDSTGFAFTCFSSCSGGINRRPLQLVFTLEAPGTGKVLDICLIALKVCANPLRDSSKEDDKM
HCOI00505500.t2
p53
9
176
QTKSSKNLDYVVMRNKCGMTLYSKSELMVPFVFSTSNNCEPNSMIRVHAEYTEERYANKPVERCPNHQYKDTLAATANIRQHFVRCEHVGAEYVEKDGGYFVRIPMCDSTGFAFTCFSSCSGGINRRPLQLVFTLEAPGTGKVLDICLIALKVCANPLRDSSKEDDKM
HCOI00505500.t3
p53
9
176
QTKSSKNLDYVVMRNKCGMTLYSKSELMVPFVFSTSNNCEPNSMIRVHAEYTEERYANKPVERCPNHQYKDTLAATANIRQHFVRCEHVGAEYVEKDGGYFVRIPMCDSTGFAFTCFSSCSGGINRRPLQLVFTLEAPGTGKVLDICLIALKVCANPLRDSSKEDDKM
Links
Other
p53
family TFs
Other
Haemonchus contortus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_04591
Cladophialophora psammophila
A1O5_04591
N
G647_05092
Cladophialophora carrionii
G647_05092
N
PV04_03482
Capronia semiimmersa
PV04_03482
N
PV07_06862
Cladophialophora immunda
PV07_06862
N
Z517_10546
Fonsecaea pedrosoi
Z517_10546
N
Z518_01493
Rhinocladiella mackenziei
Z518_01493
N
Z519_02419
Cladophialophora bantiana
Z519_02419
N