ENSPVAG00000003364 (Pteropus vampyrus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSPVAG00000003364 T313611_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		1.000 1.000
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.956 0.956
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.956 0.956
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.911 0.911
ENSGACG00000007469
M02432_2.00 		Gasterosteus aculeatus
NVNMGAWACH
DGTWTCKNBN		 PBM
Weirauch et al.(2014)
pTH9179 		0.822 0.822
ENSORLG00000007805
M02435_2.00 		Oryzias latipes
SCNAAWNNNN
NNNNWTTNGS		 PBM
Weirauch et al.(2014)
pTH9277 		0.822 0.822
LCORL
M02431_2.00 		Choloepus hoffmanni
NNYNAAHNN
NNDTTNRNN		 PBM
Weirauch et al.(2014)
pTH9253 		0.800 0.800
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000003178 Pipsqueak 349 394

Links

Other Pipsqueak family TFs
Other Pteropus vampyrus TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTRK_0000146000 Parastrongyloides trichosuri PTRK_0000146000 N 0.000
PTRK_0000295600 Parastrongyloides trichosuri PTRK_0000295600 N 0.000
PTRK_0000968500 Parastrongyloides trichosuri PTRK_0000968500 N 0.000
RSKR_0000113200 Rhabditophanes kr3021 RSKR_0000113200 N 0.000
RSKR_0001028000 Rhabditophanes kr3021 RSKR_0001028000 N 0.000
SPAL_0000268400 Strongyloides papillosus SPAL_0000268400 N 0.000
SPAL_0001405500 Strongyloides papillosus SPAL_0001405500 N 0.000
SSTP_0000600400 Strongyloides stercoralis SSTP_0000600400 N 0.000
SSTP_0000764200 Strongyloides stercoralis SSTP_0000764200 N 0.000
SVE_1898000 Strongyloides venezuelensis SVE_1898000 N 0.000