bab (Drosophila virilis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 FBgn0064311 T313657_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bab1
M06440_2.00 		Drosophila melanogaster
AAYAWWWATA
TATWAWTRTT		 B1H
Zhu et al.(2011)
bab1_FlyReg_FBgn0004870 		1.000 1.000
bab1
M06441_2.00 		Drosophila melanogaster
KAATTAWATAW
WTATWTAATTM		 B1H
Zhu et al.(2011)
bab1_SANGER_5_FBgn0004870 		1.000 1.000
bab1
M09690_2.00 		Drosophila melanogaster
AHWAYWATAWAHAT
ATDTWTATWRTWDT		 Misc
Kulakovskiy et al.(2009)
bab1 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0227116 Pipsqueak 55 100

Links

Other Pipsqueak family TFs
Other Drosophila virilis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000003669 Ailuropoda melanoleuca ENSAMEG00000003669 N
ENSBTAP00000000060-D1 Bos grunniens ENSBTAP00000000060-D1 N
ENSCSAG00000015779 Chlorocebus sabaeus ENSCSAG00000015779 N
ENSMMUP00000004120 Macaca fascicularis ENSMMUP00000004120 N
ENSMPUG00000011503 Mustela putorius furo ENSMPUG00000011503 N
ENSNLEG00000008175 Nomascus leucogenys ENSNLEG00000008175 N
ENSOARG00000004360 Ovis aries ENSOARG00000004360 N
ENSPANG00000026126 Papio anubis ENSPANG00000026126 N
ENSSTOG00000014067 Ictidomys tridecemlineatus ENSSTOG00000014067 N
Snapc4 Mus musculus ENSMUSG00000036281 N
SNAPC4 Tursiops truncatus ENSTTRG00000007574 N
SNAPC4 Tupaia belangeri ENSTBEG00000013641 N
Snapc4 Rattus norvegicus ENSRNOG00000018845 N
SNAPC4 Pteropus vampyrus ENSPVAG00000001344 N
SNAPC4 Pan troglodytes ENSPTRG00000021554 N
SNAPC4 Procavia capensis ENSPCAG00000013146 N
SNAPC4 Otolemur garnettii ENSOGAG00000015861 N
SNAPC4 Monodelphis domestica ENSMODG00000017566 N
SNAPC4 Macaca mulatta ENSMMUG00000003086 N
SNAPC4 Microcebus murinus ENSMICG00000005804 N
SNAPC4 Gorilla gorilla ENSGGOG00000010887 N
SNAPC4 Homo sapiens ENSG00000165684 N
SNAPC4 Felis catus ENSFCAG00000028095 N
SNAPC4 Erinaceus europaeus ENSEEUG00000007039 N
SNAPC4 Equus caballus ENSECAG00000015762 N
SNAPC4 Dasypus novemcinctus ENSDNOG00000025543 N
SNAPC4 Canis familiaris ENSCAFG00000019683 N