LDEC000978 (Leptinotarsa decemlineata)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 LDEC000978 T314525_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC000978-PA Pipsqueak 346 390

Links

Other Pipsqueak family TFs
Other Leptinotarsa decemlineata TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29788.m000340 Ricinus communis 29788.m000340 I
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I
ATMYB48 Arabidopsis thaliana AT3G46130 I
ATMYB48-1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001097 I
AtMYB79 Arabidopsis thaliana AT4G13480 I
BGIOSGA006030 Oryza indica BGIOSGA006030 I
BGIOSGA014750 Oryza indica BGIOSGA014750 I
Bo1g098860 Brassica oleracea Bo1g098860 I
Bo3g083130 Brassica oleracea Bo3g083130 I
Bo7g033260 Brassica oleracea Bo7g033260 I
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I
Bra001941 Brassica rapa Bra001941 I
Bra015029 Brassica rapa Bra015029 I
Bra020744 Brassica rapa Bra020744 I
Bra028369 Brassica rapa Bra028369 I
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I
Carubv10007255m.g Capsella rubella Carubv10007255m.g I
Carubv10014367m.g Capsella rubella Carubv10014367m.g I
Carubv10017875m.g Capsella rubella Carubv10017875m.g I
cassava13589.valid.m1 Manihot esculenta cassava13589.valid.m1 I
cassava15759.m1 Manihot esculenta cassava15759.m1 N
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I
cassava9891.m1 Manihot esculenta cassava9891.m1 I
Ca_07872 Cicer arietinum Ca_07872 I
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I
Cla007745 Citrullus lanatus Cla007745 I
Cla016762 Citrullus lanatus Cla016762 I
Cla021798 Citrullus lanatus Cla021798 I
Cucsa.238540 Cucumis sativus Cucsa.238540 I
Cucsa.255900 Cucumis sativus Cucsa.255900 I
Cucsa.383230 Cucumis sativus Cucsa.383230 I
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I
evm.TU.supercontig_14.220 Carica papaya evm.TU.supercontig_14.220 I
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I
F775_06959 Aegilops tauschii F775_06959 I
F775_23572 Aegilops tauschii F775_23572 I
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I
GLYMA08G27660 Glycine max GLYMA08G27660 I
GLYMA10G26681 Glycine max GLYMA10G26681 I
GLYMA17G17560 Glycine max GLYMA17G17560 I
GLYMA20G20980 Glycine max GLYMA20G20980 I
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I
Gorai.001G107900 Gossypium raimondii Gorai.001G107900 I
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I
GRMZM2G027697 Zea mays GRMZM2G027697 I
GRMZM2G043792 Zea mays GRMZM2G043792 I
GSMUA_Achr11G02410_001 Musa acuminata GSMUA_Achr11G02410_001 I
GSMUA_Achr11G17190_001 Musa acuminata GSMUA_Achr11G17190_001 I
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I
GSMUA_Achr4G29230_001 Musa acuminata GSMUA_Achr4G29230_001 I
LPERR04G14700 Leersia perrieri LPERR04G14700 I
Lus10005886.g Linum usitatissimum Lus10005886.g I
Lus10014453.g Linum usitatissimum Lus10014453.g I
Lus10023711.g Linum usitatissimum Lus10023711.g I
Lus10034372.g Linum usitatissimum Lus10034372.g I
MDP0000133412 Malus domestica MDP0000133412 I
MDP0000183451 Malus domestica MDP0000183451 I
MDP0000286143 Malus domestica MDP0000286143 I
mgf004640m Mimulus guttatus mgf004640m I
MLOC_6786 Hordeum vulgare MLOC_6786 I
MTR_1g045610 Medicago truncatula MTR_1g045610 I
MTR_1g073170 Medicago truncatula MTR_1g073170 I
MYB305 Arabidopsis thaliana AT3G24310 I
MYB59 Arabidopsis thaliana AT5G59780 D
MYB59 Arabidopsis lyrata fgenesh2_kg.8__1928__AT5G59780.3 I
OB02G31640 Oryza brachyantha OB02G31640 I
OB04G25360 Oryza brachyantha OB04G25360 I
OBART02G24300 Oryza barthii OBART02G24300 I
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I
OMERI02G23750 Oryza meridionalis OMERI02G23750 I
ONIVA09G12460 Oryza nivara ONIVA09G12460 I
OPUNC02G22200 Oryza punctata OPUNC02G22200 I
orange1.1g023677m.g Citrus sinensis orange1.1g023677m.g I
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I
ORGLA04G0153500 Oryza glaberrima ORGLA04G0153500 I
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I
ORUFI04G19690 Oryza rufipogon ORUFI04G19690 I
OS02G0618400 Oryza sativa OS02G0618400 I
OS04G0508500 Oryza sativa OS04G0508500 I
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I
Pavir.Ga01308 Panicum virgatum Pavir.Ga01308 I
Pavir.J37992 Panicum virgatum Pavir.J37992 I
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I
Pm009050 Prunus mume Pm009050 I
Pm015392 Prunus mume Pm015392 I
POPTR_0001s24220 Populus trichocarpa POPTR_0001s24220 I
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I
POPTR_0009s03240 Populus trichocarpa POPTR_0009s03240 I
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I
POPTR_0017s13370 Populus trichocarpa POPTR_0017s13370 I
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I
SapurV1A.0008s0940 Salix purpurea SapurV1A.0008s0940 I
SapurV1A.0008s0950 Salix purpurea SapurV1A.0008s0950 I
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I
SapurV1A.0040s0010 Salix purpurea SapurV1A.0040s0010 I
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I
SapurV1A.0489s0220 Salix purpurea SapurV1A.0489s0220 I
Sb04g026210 Sorghum bicolor Sb04g026210 I
Si010822m.g Setaria italica Si010822m.g I
Si018007m.g Setaria italica Si018007m.g I
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I
TCM_000535 Theobroma cacao TCM_000535 I
TCM_018971 Theobroma cacao TCM_018971 I
TCM_021037 Theobroma cacao TCM_021037 I
TCM_041904 Theobroma cacao TCM_041904 I
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I
Thhalv10002648m.g Eutrema salsugineum Thhalv10002648m.g I
Thhalv10014524m.g Eutrema salsugineum Thhalv10014524m.g I
Traes_2AL_605C25CDF Triticum aestivum Traes_2AL_605C25CDF I
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I
TRIUR3_18020 Triticum urartu TRIUR3_18020 I
TRIUR3_31527 Triticum urartu TRIUR3_31527 I
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I