CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RSKR_0000834400
(
Rhabditophanes kr3021
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
RSKR_0000834400
T315116_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RSKR_0000834400.1
Pipsqueak
80
124
TQENLEAAVDDIRTKKLGTRKASVVYGIPRSTLRNKIYKLETELA
RSKR_0000834400.1
Pipsqueak
269
314
NKDALDEAVKSVRLGEMSVHRAGSYFGVPHSTLEYKVKERKTKRSL
Links
Other
Pipsqueak
family TFs
Other
Rhabditophanes kr3021
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_08146
Ascaris suum
ASU_08146
N
0.788
CJA11562
Caenorhabditis japonica
CJA11562
N
0.793
CRE07418
Caenorhabditis remanei
CRE07418
N
0.782
LOAG_18975
Loa loa
LOAG_18975
N
0.786
PTRK_0000738400
Parastrongyloides trichosuri
PTRK_0000738400
N
0.814
SPAL_0001308000
Strongyloides papillosus
SPAL_0001308000
N
0.816
SSTP_0000853200
Strongyloides stercoralis
SSTP_0000853200
N
0.788
SVE_0358800
Strongyloides venezuelensis
SVE_0358800
N
0.812