chr3.CM0396.500.nd (Lotus japonicus)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 chr3.CM0396.500.nd T316214_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0396.500.nd PLATZ 4 80

Links

Other PLATZ family TFs
Other Lotus japonicus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29589.m001281 Ricinus communis 29589.m001281 N 0.720
30054.m000824 Ricinus communis 30054.m000824 N 0.722
30078.m002228 Ricinus communis 30078.m002228 N 0.701
Aquca_009_01064 Aquilegia coerulea Aquca_009_01064 N 0.740
BGIOSGA026486 Oryza indica BGIOSGA026486 N 0.701
Bostr.27991s0138 Boechera stricta Bostr.27991s0138 N 0.727
Bra034379 Brassica rapa Bra034379 N 0.740
Cagra.15046s0001 Capsella grandiflora Cagra.15046s0001 N 0.727
Carubv10024278m.g Capsella rubella Carubv10024278m.g N 0.727
cassava28497.m1 Manihot esculenta cassava28497.m1 N 0.714
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N 0.722
cassava9017.m1 Manihot esculenta cassava9017.m1 N 0.701
Ca_00735 Cicer arietinum Ca_00735 N 0.722
Ca_17446 Cicer arietinum Ca_17446 N 0.753
Ca_19047 Cicer arietinum Ca_19047 N 0.750
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N 0.736
Ciclev10030107m.g Citrus clementina Ciclev10030107m.g N 0.740
Cla001071 Citrullus lanatus Cla001071 N 0.757
Cucsa.200310 Cucumis sativus Cucsa.200310 N 0.743
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.722
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N 0.750
evm.TU.supercontig_30.61 Carica papaya evm.TU.supercontig_30.61 N 0.701
evm.TU.supercontig_5.128 Carica papaya evm.TU.supercontig_5.128 N 0.750
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.740
GLYMA10G07240 Glycine max GLYMA10G07240 N 0.714
GLYMA12G08810 Glycine max GLYMA12G08810 N 0.725
GLYMA13G21140 Glycine max GLYMA13G21140 N 0.701
GLYMA19G37220 Glycine max GLYMA19G37220 N 0.701
Gorai.001G117900 Gossypium raimondii Gorai.001G117900 N 0.753
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.750
Gorai.009G411100 Gossypium raimondii Gorai.009G411100 N 0.714
GRMZM2G086403 Zea mays GRMZM2G086403 N 0.708
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.701
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.701
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.727
Lus10000482.g Linum usitatissimum Lus10000482.g N 0.722
Lus10004577.g Linum usitatissimum Lus10004577.g N 0.736
Lus10027735.g Linum usitatissimum Lus10027735.g N 0.736
Lus10030968.g Linum usitatissimum Lus10030968.g N 0.708
Lus10035554.g Linum usitatissimum Lus10035554.g N 0.736
Lus10040082.g Linum usitatissimum Lus10040082.g N 0.708
mgf006916m Mimulus guttatus mgf006916m N 0.733
mgf013167m Mimulus guttatus mgf013167m N 0.733
mgf023930m Mimulus guttatus mgf023930m N 0.750
MTR_7g102790 Medicago truncatula MTR_7g102790 N 0.736
OBART08G23610 Oryza barthii OBART08G23610 N 0.701
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N 0.701
OLONG_020563 Oryza longistaminata OLONG_020563 N 0.701
OMERI08G18450 Oryza meridionalis OMERI08G18450 N 0.701
ONIVA08G26670 Oryza nivara ONIVA08G26670 N 0.701
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N 0.736
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.770
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N 0.701
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N 0.701
OS08G0560300 Oryza sativa OS08G0560300 N 0.701
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.736
PK29286.1 Cannabis sativa PK29286.1 N 0.750
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N 0.722
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.743
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N 0.708
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.757
POPTR_0016s10920 Populus trichocarpa POPTR_0016s10920 N 0.736
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N 0.778
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.747
SapurV1A.0360s0060 Salix purpurea SapurV1A.0360s0060 N 0.730
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.701
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.726
TCM_022356 Theobroma cacao TCM_022356 N 0.727
TCM_041560 Theobroma cacao TCM_041560 N 0.727
VIT_08s0007g04560 Vitis vinifera VIT_08s0007g04560 N 0.714