CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000015166
(
Gadus morhua
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSGMOG00000015166
T316478_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.810
0.810
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.810
0.810
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.810
0.810
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000016231
Prospero
462
614
GLNPNHLKKAKLMFFYTRYPSSNVLKTYFPDVKFNRCITSQLIKWFSNFREFYYIQMEKFARQAIVDGVNNVDNLSVSRDSELFRALNMHYNKANDFQVPDRFLEVAEITLHEFYNAISTAKDSDPSWKKAIYKVICKLDSDLPEEFKTSSCL
Links
Other
Prospero
family TFs
Other
Gadus morhua
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000001476
Astyanax mexicanus
ENSAMXG00000001476
N
0.000
ENSONIG00000007946
Oreochromis niloticus
ENSONIG00000007946
N
0.000
ENSONIG00000009814
Oreochromis niloticus
ENSONIG00000009814
N
0.000
ENSPFOG00000004031
Poecilia formosa
ENSPFOG00000004031
N
0.000
ENSXMAG00000002499
Xiphophorus maculatus
ENSXMAG00000002499
N
0.000
her13
Tetraodon nigroviridis
ENSTNIG00000014324
N
0.000
her13
Takifugu rubripes
ENSTRUG00000006688
N
0.000
HES6
Anolis carolinensis
ENSACAG00000028166
N
0.000
hes6
Danio rerio
ENSDARG00000019335
N
0.000
hes6
Oryzias latipes
ENSORLG00000015432
N
0.000
Pvit_13984
Pogona vitticeps
Pvit_13984
N
0.000