CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSLACG00000013691 *(Latimeria chalumnae)* Prospero
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF05044 (HPD)	IPR007738	ENSLACG00000013691	T316479_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PROX1 M03445_2.00	Homo sapiens	BAAGRCGTCTTV	BAAGACGYCTTV	SELEX Jolma et al.(2013) PROX1_1	0.893	0.893
PROX1 M05691_2.00	Homo sapiens	BAMGRCGTCDTV	BAHGACGYCKTV	SELEX Yin et al.(2017) PROX1_eDBD_HT-SELEX	0.893	0.893
PROX1 M05692_2.00	Homo sapiens	BAAGRYGTCTTV	BAAGACRYCTTV	SELEX Yin et al.(2017) PROX1_eDBD_Methyl-HT-SELEX	0.893	0.893
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSLACP00000015554	Prospero	578	689	GLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELTISRDCELYRALNMHYNKANDFEMNESSISLAQLSLQ

Links
Other Prospero family TFs
Other *Latimeria chalumnae* TFs