CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prox1.L
(
Xenopus laevis
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
XB-GENE-485331
T316669_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.954
0.954
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.954
0.954
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.954
0.954
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAC28353
Prospero
1
131
PNHFKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMERYARQAINDGITSTEELCITRDCELYRALNMHYNKANNFEVPERFLEVAQITLRESFNAIIAGKDVDPSWKKAIYK
BAB17310
Prospero
582
735
GLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGITSTEELCITRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIIAGKDVDPSWKNAIYKVICKLDSEVPDIFRSPNCLQ
Links
Other
Prospero
family TFs
Other
Xenopus laevis
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA010669
Anopheles culicifacies
ACUA010669
I
CLEC004479
Cimex lectularius
CLEC004479
I
crc
Drosophila melanogaster
FBgn0000370
D
GB48366
Apis mellifera
GB48366
I
GD24317
Drosophila simulans
FBgn0195664
I
GE12912
Drosophila yakuba
FBgn0230627
I
GF14324
Drosophila ananassae
FBgn0091351
I
GG21297
Drosophila erecta
FBgn0113476
I
GH13312
Drosophila grimshawi
FBgn0120788
I
GI12209
Drosophila mojavensis
FBgn0134966
I
GJ17848
Drosophila virilis
FBgn0205016
I
GK18737
Drosophila willistoni
FBgn0220735
I
GL26659
Drosophila persimilis
FBgn0164240
I
GM16908
Drosophila sechellia
FBgn0171821
I
GM23408
Drosophila sechellia
FBgn0178275
I
HHAL002506-PA
Halyomorpha halys
HHAL002506-PA
I
LCUP013556
Lucilia cuprina
LCUP013556
I
LLOJ001925
Lutzomyia longipalpis
LLOJ001925
I
MDOA011040
Musca domestica
MDOA011040
I