CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REL
(
Oryctolagus cuniculus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSOCUG00000004968
T317350_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.970
0.970
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.970
0.970
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.970
0.970
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.970
0.970
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.947
0.947
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000004298
Rel
14
182
IEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIINYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIISRISAGINPFNVPEQQLLDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
Links
Other
Rel
family TFs
Other
Oryctolagus cuniculus
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R010550
Calypte anna
Aan_R010550
I
Afo_R015982
Aptenodytes forsteri
Afo_R015982
I
Cmyd_10021233
Chelonia mydas
Cmyd_10021233
I
ENSAMEG00000014972
Ailuropoda melanoleuca
ENSAMEG00000014972
I
ENSAPLG00000013833
Anas platyrhynchos
ENSAPLG00000013833
I
ENSBTAP00000042141-D1
Bos grunniens
ENSBTAP00000042141-D1
I
ENSCSAG00000011159
Chlorocebus sabaeus
ENSCSAG00000011159
I
ENSFALG00000004875
Ficedula albicollis
ENSFALG00000004875
I
ENSGGOG00000026943
Gorilla gorilla
ENSGGOG00000026943
I
ENSMPUG00000006828
Mustela putorius furo
ENSMPUG00000006828
I
ENSNLEG00000017101
Nomascus leucogenys
ENSNLEG00000017101
I
ENSOARG00000007598
Ovis aries
ENSOARG00000007598
I
ENSP00000364022
Macaca fascicularis
ENSP00000364022
I
ENSSHAG00000009700
Sarcophilus harrisii
ENSSHAG00000009700
I
ENSSSCG00000005390
Sus scrofa
ENSSSCG00000005390
I
ENSSTOG00000026763
Ictidomys tridecemlineatus
ENSSTOG00000026763
I
Gfo_R006190
Geospiza fortis
Gfo_R006190
I
MSANTD3
Gallus gallus
ENSGALG00000013403
I
msantd3
Xenopus tropicalis
XB-GENE-5737820
I
MSANTD3
Bos taurus
ENSBTAG00000037580
I
MSANTD3
Dasypus novemcinctus
ENSDNOG00000035872
I
MSANTD3
Taeniopygia guttata
ENSTGUG00000008752
I
Msantd3
Rattus norvegicus
ENSRNOG00000008159
I
MSANTD3
Pan troglodytes
ENSPTRG00000038720
I
MSANTD3
Otolemur garnettii
ENSOGAG00000024703
I
MSANTD3
Ornithorhynchus anatinus
ENSOANG00000002115
I
MSANTD3
Anolis carolinensis
ENSACAG00000025458
I
Msantd3
Mus musculus
ENSMUSG00000039693
I
MSANTD3
Equus caballus
ENSECAG00000021233
I
MSANTD3
Monodelphis domestica
ENSMODG00000012608
I
MSANTD3
Homo sapiens
ENSG00000066697
D
MSANTD3
Myotis lucifugus
ENSMLUG00000029223
I
MSANTD3
Loxodonta africana
ENSLAFG00000031827
I
MSANTD3
Meleagris gallopavo
ENSMGAG00000007604
I
MSANTD3-TMEFF1
Canis familiaris
ENSCAFG00000002577
I
MSANTD3-TMEFF1
Felis catus
ENSFCAG00000030912
I
MSANTD3-TMEFF1
Oryctolagus cuniculus
ENSOCUG00000006373
I
MSANTD3-TMEFF1
Callithrix jacchus
ENSCJAG00000011484
I
MSANTD3-TMEFF1
Macaca mulatta
ENSMMUG00000009775
I
msantd3.L
Xenopus laevis
XB-GENE-5737853
I
Ogr12786
Ophisaurus gracilis
Ogr12786
I
Pvit_18499
Pogona vitticeps
Pvit_18499
I
Tal_R010083
Tyto alba
Tal_R010083
I