CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000008168
(
Ictidomys tridecemlineatus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSSTOG00000008168
T317515_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nfatc1
M09360_2.00
Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM
Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A
0.958
0.958
NFATC1
M02443_2.00
Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8315
0.944
0.944
NFATC1
M02444_2.00
Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN
PBM
Weirauch et al.(2014)
pTH8401
0.944
0.944
nfatc1
M02446_2.00
Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN
PBM
Weirauch et al.(2014)
pTH8557
0.930
0.930
NFATC1
M03449_2.00
Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD
SELEX
Jolma et al.(2013)
NFATC1_1
0.930
0.930
NFATC1
M03450_2.00
Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA
SELEX
Jolma et al.(2013)
NFATC1_2
0.930
0.930
NFATC1
M03451_2.00
Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN
SELEX
Jolma et al.(2013)
NFATC1_3
0.930
0.930
NFATC1
M02747_2.00
Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH
SELEX
Jolma et al.(2010)
NFATc1_dimer
0.930
0.930
NFATC1
M02748_2.00
Homo sapiens
GGAANDTTCC
GGAAHNTTCC
SELEX
Jolma et al.(2010)
NFATc1_dimer_type2
0.930
0.930
NFATC1
M02749_2.00
Homo sapiens
WDTTTCCAY
RTGGAAAHW
SELEX
Jolma et al.(2010)
NFATc1_monomer
0.930
0.930
NFATC1
M05711_2.00
Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1
0.930
0.930
NFATC1
M05712_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2
0.930
0.930
NFATC1
M09349_2.00
Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD
Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B
0.930
0.930
NFATC1
M09625_2.00
Homo sapiens
WBTTTCCAYY
RRTGGAAAVW
Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al.
0.930
0.930
NFATC1
M11232_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q4
0.930
0.930
NFATC1
M11233_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5_01
0.930
0.930
NFATC1
M11234_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT2_Q5
0.930
0.930
NFATC1
M05713_2.00
Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1
0.930
0.930
NFATC1
M05714_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2
0.930
0.930
Nfatc2
M09357_2.00
Mus musculus
NWTTTTCCW
WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C
0.853
0.853
NFATC3
M02440_2.00
Homo sapiens
DNTTTCCRNN
NNYGGAAANH
PBM
Weirauch et al.(2014)
pTH9192
0.846
0.846
NFATC3
M05693_2.00
Homo sapiens
WNTTTCCRYN
NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1
0.846
0.846
NFATC3
M05694_2.00
Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2
0.846
0.846
NFATC3
M05695_2.00
Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH
SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3
0.846
0.846
NFATC3
M09343_2.00
Homo sapiens
RDTTTTCCA
TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B
0.846
0.846
Nfatc3
M09359_2.00
Mus musculus
RDTTTTCCA
TGGAAAAHY
Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B
0.846
0.846
NFATC3
M11217_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q3
0.846
0.846
NFATC3
M11218_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT4_Q5
0.846
0.846
NFATC3
M05696_2.00
Homo sapiens
WNTTTCCRYN
NRYGGAAANW
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1
0.846
0.846
NFATC3
M05697_2.00
Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2
0.846
0.846
NFATC3
M05698_2.00
Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY
SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3
0.846
0.846
NFATC2
M02441_2.00
Homo sapiens
WNTTTCCRHN
NDYGGAAANW
PBM
Weirauch et al.(2014)
pTH9196
0.839
0.839
NFATC2
M05705_2.00
Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1
0.839
0.839
NFATC2
M05706_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2
0.839
0.839
NFATC2
M09346_2.00
Homo sapiens
NWTTTTCCW
WGGAAAAWN
Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B
0.839
0.839
NFATC2
M11221_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q4
0.839
0.839
NFATC2
M11222_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q5
0.839
0.839
NFATC2
M11223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT1_Q6
0.839
0.839
NFATC2
M08462_2.00
Homo sapiens
TTTTCCA
TGGAAAA
COMPILED
Mathelier et al.(2014)
MA0152.1
0.839
0.839
NFATC2
M05707_2.00
Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1
0.839
0.839
NFATC2
M05708_2.00
Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN
SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2
0.839
0.839
NFATC4
M01306_2.00
Homo sapiens
NNNWWWVYRN
NYRBWWWNNN
PBM
Lambert et al.(2019)
pTH9347
0.811
0.811
NFATC4
M05701_2.00
Homo sapiens
DBTTTCCRYN
NRYGGAAAVH
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1
0.811
0.811
NFATC4
M05702_2.00
Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2
0.811
0.811
NFATC4
M09345_2.00
Homo sapiens
HNDBTTTCCN
NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C
0.811
0.811
Nfatc4
M09354_2.00
Mus musculus
HNDBTTTCCN
NGGAAAVHND
Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C
0.811
0.811
NFATC4
M11219_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3_01
0.811
0.811
NFATC4
M11220_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFAT3_Q3
0.811
0.811
NFATC4
M05703_2.00
Homo sapiens
DNTTTCCRYN
NRYGGAAANH
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1
0.811
0.811
NFATC4
M05704_2.00
Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN
SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2
0.811
0.811
ENSTNIG00000018271
M02445_2.00
Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH
PBM
Weirauch et al.(2014)
pTH9005
0.762
0.762
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000007317
Rel
428
588
LRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLENEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEALLCNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHVPQPSGRTLSLQVASNPIECS
Links
Other
Rel
family TFs
Other
Ictidomys tridecemlineatus
TFs
240 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_01837
Exophiala aquamarina
A1O9_01837
I
0.000
AFUA_5G12930
Aspergillus fumigatus
CADAFUAG00006653
I
0.000
AFUA_7G04170
Aspergillus fumigatus
CADAFUAG00009404
N
0.000
ANIA_06846
Aspergillus nidulans
CADANIAG00007644
D
0.000
ATEG_04297
Aspergillus terreus
CADATEAG00009296
N
0.000
AUEXF2481DRAFT_4029
Aureobasidium subglaciale
AUEXF2481DRAFT_4029
I
0.000
AUEXF2481DRAFT_456199
Aureobasidium subglaciale
AUEXF2481DRAFT_456199
I
0.000
BDDG_02031
Blastomyces dermatitidis
BDDG_02031
I
0.000
CADAFLAG00000127
Aspergillus flavus
CADAFLAG00000127
N
0.000
CADANGAG00010600
Aspergillus niger
CADANGAG00010600
N
0.000
CANTEDRAFT_92253
Candida tenuis
CANTEDRAFT_92253
N
0.000
CIMG_04661
Coccidioides immitis
CIMG_04661
I
0.000
CY34DRAFT_805433
Suillus luteus
CY34DRAFT_805433
N
0.000
DEHA2D16016g
Debaryomyces hansenii
DEHA2D16016g
I
0.000
EURHEDRAFT_460772
Aspergillus ruber
EURHEDRAFT_460772
N
0.000
EURHEDRAFT_528519
Aspergillus ruber
EURHEDRAFT_528519
I
0.000
FFUJ_09498
Fusarium fujikuroi
FFUJ_09498
N
0.000
FFUJ_12947
Fusarium fujikuroi
FFUJ_12947
N
0.000
FGRRES_16159
Fusarium graminearum
FGRRES_16159
N
0.000
FGRRES_16927
Fusarium graminearum
FGRRES_16927
N
0.000
FOXG_11581
Fusarium oxysporum
FOXG_11581
N
0.000
FPSE_04457
Fusarium pseudograminearum
FPSE_04457
N
0.000
FPSE_05211
Fusarium pseudograminearum
FPSE_05211
N
0.000
FVEG_10243
Fusarium verticillioides
FVEG_10243
N
0.000
GNLVRS01_PISO0I00844g
Millerozyma farinosa
GNLVRS01_PISO0I00844g
N
0.000
GNLVRS01_PISO0I18070g
Millerozyma farinosa
GNLVRS01_PISO0I18070g
N
0.000
GNLVRS01_PISO0J19831g
Millerozyma farinosa
GNLVRS01_PISO0J19831g
N
0.000
HMPREF1624_01132
Sporothrix schenckii
HMPREF1624_01132
I
0.000
M437DRAFT_56308
Aureobasidium melanogenum
M437DRAFT_56308
I
0.000
M438DRAFT_317248
Aureobasidium pullulans
M438DRAFT_317248
I
0.000
M438DRAFT_344531
Aureobasidium pullulans
M438DRAFT_344531
I
0.000
MGG_06778
Magnaporthe oryzae
MGG_06778
N
0.000
NFIA_074150
Neosartorya fischeri
CADNFIAG00007185
I
0.000
PAN0_005c2519
Pseudozyma antarctica
PAN0_005c2519
N
0.000
PDE_09179
Penicillium oxalicum
PDE_09179
I
0.000
PEX1_066340
Penicillium expansum
PEX1_066340
I
0.000
PGUG_00594
Candida guilliermondii
PGUG_00594
N
0.000
PGUG_00594
Meyerozyma guilliermondii
PGUG_00594
N
0.000
PGUG_05832
Meyerozyma guilliermondii
PGUG_05832
I
0.000
PGUG_05832
Candida guilliermondii
PGUG_05832
I
0.000
PHSY_000986
Pseudozyma hubeiensis
PHSY_000986
N
0.000
PITC_033600
Penicillium italicum
PITC_033600
I
0.000
PSEUBRA_SCAF5g02278
Pseudozyma brasiliensis
PSEUBRA_SCAF5g02278
N
0.000
PV06_02854
Exophiala oligosperma
PV06_02854
N
0.000
PV08_10014
Exophiala spinifera
PV08_10014
N
0.000
PV09_06702
Verruconis gallopava
PV09_06702
I
0.000
PV10_03721
Exophiala mesophila
PV10_03721
N
0.000
PVAR5_1869
Byssochlamys spectabilis
PVAR5_1869
N
0.000
PVAR5_2678
Byssochlamys spectabilis
PVAR5_2678
N
0.000
PVAR5_5942
Byssochlamys spectabilis
PVAR5_5942
I
0.000
S40285_05647
Stachybotrys chlorohalonata
S40285_05647
N
0.000
S40288_10288
Stachybotrys chartarum
S40288_10288
I
0.000
SAPIO_CDS4479
Scedosporium apiospermum
SAPIO_CDS4479
I
0.000
sr13818
Sporisorium reilianum
sr13818
N
0.000
TSTA_020390
Talaromyces stipitatus
TSTA_020390
I
0.000
U727_00434270371
Penicillium solitum
U727_00434270371
I
0.000
UM02765
Ustilago maydis
UM02765
N
0.000
V565_080510
Rhizoctonia solani
V565_080510
N
0.000
Z517_09549
Fonsecaea pedrosoi
Z517_09549
N
0.000
Z518_00888
Rhinocladiella mackenziei
Z518_00888
N
0.000
ZBAI_02843
Zygosaccharomyces bailii
ZBAI_02843
I
0.000
ZYRO0G12584g
Zygosaccharomyces rouxii
ZYRO0G12584g
N
0.000