K443DRAFT_673983 (Laccaria amethystina)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02257 (RFX_DNA_binding) IPR003150 K443DRAFT_673983 T318652_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RFX1
M00066_2.00 		Saccharomyces cerevisiae
NSGTTGCYAN
NTRGCAACSN		 PBM
Badis et al.(2008)
RFX1_4537 		0.651 0.430
RFX1
M07494_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0365.1 		0.651 0.430
RFX1
M08600_2.00 		Saccharomyces cerevisiae
CGTYRBYAYRGYWACM
KGTWRCYRTRVYRACG		 Misc
DeBoer et al.(2011)
YLR176C_1478 		0.651 0.430
RFX1
M08601_2.00 		Saccharomyces cerevisiae
BGTTRCYA
TRGYAACV		 Misc
DeBoer et al.(2011)
YLR176C_496 		0.651 0.430
RFX1
M11251_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RFX1_02 		0.651 0.430
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIK06696 RFX 184 262

Links

Other RFX family TFs
Other Laccaria amethystina TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA05G07066 Glycine max GLYMA05G07066 N
GLYMA10G26265 Glycine max GLYMA10G26265 N
GLYMA13G02241 Glycine max GLYMA13G02241 N
GLYMA18G14551 Glycine max GLYMA18G14551 N
GLYMA18G23910 Glycine max GLYMA18G23910 N
GLYMA19G08820 Glycine max GLYMA19G08820 N
GLYMA20G16793 Glycine max GLYMA20G16793 N
GLYMA20G21351 Glycine max GLYMA20G21351 N
LjSGA_019514.3 Lotus japonicus LjSGA_019514.3 N