ENSAPLG00000007026 (Anas platyrhynchos)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSAPLG00000007026 T319336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.820 0.820
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.820 0.820
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.947 0.947
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.947 0.947
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.947 0.947
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.820 0.820
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.820 0.820
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.947 0.947
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.947 0.947
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.820 0.820
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.820 0.820
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.820 0.820
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.800 0.800
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.800 0.800
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.921 0.921
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.921 0.921
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.921 0.921
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.800 0.800
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.921 0.921
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.921 0.921
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.921 0.921
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.921 0.921
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.921 0.921
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.921 0.921
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.895 0.895
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.780 0.780
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.895 0.895
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.780 0.780
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.780 0.780
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.780 0.780
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.780 0.780
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.895 0.895
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.895 0.895
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.895 0.895
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.780 0.780
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.780 0.780
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.789 0.789
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.789 0.789
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.789 0.789
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.789 0.789
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000006638 Runt 7 57
ENSAPLP00000006639 Runt 1 38

Links

Other Runt family TFs
Other Anas platyrhynchos TFs

286 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06649 Capronia coronata A1O1_06649 I 0.000
A1O3_10484 Capronia epimyces A1O3_10484 I 0.000
A1O5_10159 Cladophialophora psammophila A1O5_10159 I 0.000
A1O7_01941 Cladophialophora yegresii A1O7_01941 I 0.000
A1O9_06866 Exophiala aquamarina A1O9_06866 I 0.000
ACLA_030770 Aspergillus clavatus CADACLAG00002327 I 0.000
AFUA_1G03800 Aspergillus fumigatus CADAFUAG00009294 I 0.000
ANIA_10504 Aspergillus nidulans CADANIAG00004652 I 0.000
ARB_01292 Arthroderma benhamiae ARB_01292 I 0.000
ATEG_03831 Aspergillus terreus CADATEAG00008906 I 0.000
CADANGAG00014030 Aspergillus niger CADANGAG00014030 I 0.000
CADAORAG00001531 Aspergillus oryzae CADAORAG00001531 N 0.000
CIMG_04610 Coccidioides immitis CIMG_04610 I 0.000
COCCADRAFT_98777 Bipolaris zeicola COCCADRAFT_98777 I 0.000
COCMIDRAFT_5378 Bipolaris oryzae COCMIDRAFT_5378 I 0.000
COCSADRAFT_142075 Bipolaris sorokiniana COCSADRAFT_142075 I 0.000
COCVIDRAFT_97148 Bipolaris victoriae COCVIDRAFT_97148 I 0.000
CPC735_071910 Coccidioides posadasii CPC735_071910 I 0.000
fgenesh1_pm.00129_#_214 Aspergillus carbonarius fgenesh1_pm.00129_#_214 I 0.000
G647_09757 Cladophialophora carrionii G647_09757 I 0.000
H101_06954 Trichophyton interdigitale H101_06954 I 0.000
H105_02238 Trichophyton soudanense H105_02238 I 0.000
HCBG_00529 Histoplasma capsulatum HCBG_00529 N 0.000
HMPREF1120_04361 Exophiala dermatitidis HMPREF1120_04361 I 0.000
HMPREF1541_07144 Cyphellophora europaea HMPREF1541_07144 I 0.000
LEMA_P067510.1 Leptosphaeria maculans LEMA_P067510.1 I 0.000
MCYG_05794 Microsporum canis MCYG_05794 I 0.000
MCYG_05794 Arthroderma otae MCYG_05794 I 0.000
MGYG_02900 Microsporum gypseum MGYG_02900 I 0.000
NFIA_020870 Neosartorya fischeri CADNFIAG00001734 I 0.000
Pc16g08180 Penicillium chrysogenum Pc16g08180 I 0.000
PCH_Pc16g08180 Penicillium rubens PCH_Pc16g08180 I 0.000
PDE_02827 Penicillium oxalicum PDE_02827 N 0.000
PEX1_002120 Penicillium expansum PEX1_002120 I 0.000
PITC_030780 Penicillium italicum PITC_030780 I 0.000
PMAA_055120 Penicillium marneffei PMAA_055120 I 0.000
PMAA_055120 Talaromyces marneffei PMAA_055120 I 0.000
PV04_02129 Capronia semiimmersa PV04_02129 I 0.000
PV05_07659 Exophiala xenobiotica PV05_07659 I 0.000
PV06_07997 Exophiala oligosperma PV06_07997 I 0.000
PV07_02419 Cladophialophora immunda PV07_02419 I 0.000
PV08_03653 Exophiala spinifera PV08_03653 N 0.000
PV09_00486 Verruconis gallopava PV09_00486 I 0.000
PV10_03597 Exophiala mesophila PV10_03597 N 0.000
PV11_03531 Exophiala sideris PV11_03531 I 0.000
PVAR5_1305 Byssochlamys spectabilis PVAR5_1305 N 0.000
TEQG_00822 Trichophyton equinum TEQG_00822 I 0.000
TRV_01165 Trichophyton verrucosum TRV_01165 I 0.000
TSTA_017770 Talaromyces stipitatus TSTA_017770 I 0.000
U727_00434000191 Penicillium solitum U727_00434000191 I 0.000
UREG_01815 Uncinocarpus reesii UREG_01815 I 0.000
Z517_00016 Fonsecaea pedrosoi Z517_00016 I 0.000
Z518_05417 Rhinocladiella mackenziei Z518_05417 I 0.000
Z519_12694 Cladophialophora bantiana Z519_12694 I 0.000