ENSPFOG00000013752 (Poecilia formosa)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSPFOG00000013752 T319466_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.723 0.723
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.723 0.723
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.723 0.723
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.723 0.723
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.723 0.723
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.723 0.723
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.723 0.723
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.723 0.723
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.723 0.723
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.723 0.723
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.723 0.723
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.723 0.723
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.708 0.708
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.708 0.708
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.708 0.708
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.708 0.708
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.708 0.708
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.708 0.708
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.708 0.708
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.708 0.708
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.708 0.708
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.708 0.708
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.708 0.708
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.708 0.708
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.708 0.708
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.708 0.708
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.708 0.708
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.708 0.708
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.708 0.708
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.708 0.708
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.708 0.708
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.708 0.708
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.708 0.708
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.708 0.708
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.708 0.708
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000013771 Runt 53 183

Links

Other Runt family TFs
Other Poecilia formosa TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007315 Calypte anna Aan_R007315 I 0.767
Afo_R004888 Aptenodytes forsteri Afo_R004888 I 0.767
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I 0.708
Brh_R000794 Buceros rhinoceros Brh_R000794 I 0.747
Brh_R001637 Buceros rhinoceros Brh_R001637 I 0.767
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.715
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I 0.708
Cmyd_10021516 Chelonia mydas Cmyd_10021516 I 0.723
ENSAMEG00000005325 Ailuropoda melanoleuca ENSAMEG00000005325 I 0.723
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I 0.708
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.708
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.708
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.708
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.737
ENSAPLG00000011653 Anas platyrhynchos ENSAPLG00000011653 I 0.747
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I 0.708
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I 0.708
ENSCPOG00000002684 Cavia porcellus ENSCPOG00000002684 I 0.715
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I 0.708
ENSCSAG00000008703 Chlorocebus sabaeus ENSCSAG00000008703 I 0.723
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.708
ENSFALG00000000025 Ficedula albicollis ENSFALG00000000025 I 0.723
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I 0.708
ENSGACG00000011721 Gasterosteus aculeatus ENSGACG00000011721 I 0.846
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I 0.708
ENSGMOG00000000378 Gadus morhua ENSGMOG00000000378 N 0.792
ENSGMOG00000010468 Gadus morhua ENSGMOG00000010468 I 0.708
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I 0.715
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I 0.708
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.708
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.715
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.708
ENSLOCG00000010990 Lepisosteus oculatus ENSLOCG00000010990 I 0.715
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.708
ENSMEUG00000014419 Macropus eugenii ENSMEUG00000014419 I 0.700
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I 0.708
ENSMPUG00000001340 Mustela putorius furo ENSMPUG00000001340 I 0.723
ENSNLEG00000004310 Nomascus leucogenys ENSNLEG00000004310 I 0.723
ENSONIG00000001025 Oreochromis niloticus ENSONIG00000001025 I 0.708
ENSONIG00000001436 Oreochromis niloticus ENSONIG00000001436 I 0.862
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.708
ENSOPRG00000000765 Ochotona princeps ENSOPRG00000000765 I 0.715
ENSORLG00000018584 Oryzias latipes ENSORLG00000018584 I 0.854
ENSP00000300305 Macaca fascicularis ENSP00000300305 I 0.723
ENSP00000409227-D1 Bos grunniens ENSP00000409227-D1 I 0.723
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.708
ENSPANG00000007357 Papio anubis ENSPANG00000007357 I 0.723
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I 0.708
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.708
ENSPFOG00000016115 Poecilia formosa ENSPFOG00000016115 I 0.708
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.715
ENSPPYG00000011394 Pongo abelii ENSPPYG00000011394 I 0.723
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.708
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I 0.700
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.739
ENSPSIG00000017547 Pelodiscus sinensis ENSPSIG00000017547 I 0.723
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.708
ENSSHAG00000014782 Sarcophilus harrisii ENSSHAG00000014782 I 0.723
ENSSSCG00000012051 Sus scrofa ENSSSCG00000012051 I 0.723
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.708
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I 0.708
ENSTNIG00000009855 Tetraodon nigroviridis ENSTNIG00000009855 I 0.746
ENSTSYG00000005097 Tarsius syrichta ENSTSYG00000005097 I 0.715
ENSXMAG00000003400 Xiphophorus maculatus ENSXMAG00000003400 I 0.708
ENSXMAG00000006715 Xiphophorus maculatus ENSXMAG00000006715 I 0.969
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.708
frrunt Takifugu rubripes ENSTRUG00000006274 N 0.792
Gfo_R011596 Geospiza fortis Gfo_R011596 I 0.711
Myotis_brandtii_RUNX2_10026084 Myotis brandtii Myotis_brandtii_RUNX2_10026084 I 0.708
Ogr17914 Ophisaurus gracilis Ogr17914 I 0.723
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.715
Pvit_04762 Pogona vitticeps Pvit_04762 I 0.723
Pvit_17193 Pogona vitticeps Pvit_17193 I 0.700
RUNX1 Bos taurus ENSBTAG00000004742 I 0.723
RUNX1 Canis familiaris ENSCAFG00000009596 I 0.723
RUNX1 Callithrix jacchus ENSCJAG00000002816 I 0.723
RUNX1 Dasypus novemcinctus ENSDNOG00000015041 I 0.723
Runx1 Dipodomys ordii ENSDORG00000004347 I 0.723
RUNX1 Equus caballus ENSECAG00000003462 I 0.715
RUNX1 Homo sapiens ENSG00000159216 D 0.723
RUNX1 Gallus gallus ENSGALG00000016022 I 0.723
RUNX1 Gorilla gorilla ENSGGOG00000012862 I 0.723
RUNX1 Loxodonta africana ENSLAFG00000004290 I 0.723
RUNX1 Microcebus murinus ENSMICG00000011998 I 0.723
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.723
RUNX1 Monodelphis domestica ENSMODG00000021051 I 0.723
Runx1 Mus musculus ENSMUSG00000022952 D 0.723
RUNX1 Oryctolagus cuniculus ENSOCUG00000013731 I 0.723
RUNX1 Otolemur garnettii ENSOGAG00000033362 I 0.723
RUNX1 Procavia capensis ENSPCAG00000016747 I 0.731
RUNX1 Pan troglodytes ENSPTRG00000013883 I 0.723
RUNX1 Pteropus vampyrus ENSPVAG00000001606 I 0.723
Runx1 Rattus norvegicus ENSRNOG00000001704 I 0.723
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.700
RUNX1 Tursiops truncatus ENSTTRG00000014160 I 0.715
runx1.L Xenopus laevis XB-GENE-864949 I 0.708
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.715
RUNX2 Bos taurus ENSBTAG00000004104 I 0.708
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.708
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.708
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.708
RUNX2 Homo sapiens ENSG00000124813 D 0.708
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.708
RUNX2 Meleagris gallopavo ENSMGAG00000014267 I 0.747
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.708
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.708
Runx2 Mus musculus ENSMUSG00000039153 D 0.708
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.708
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.708
runx2 Oryzias latipes ENSORLG00000010169 I 0.708
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.708
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.708
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.715
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.708
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.708
runx2.L Xenopus laevis XB-GENE-864817 I 0.700
runx2a Danio rerio ENSDARG00000040261 I 0.715
runx2b Danio rerio ENSDARG00000059233 I 0.708
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.700
runx2b Tetraodon nigroviridis ENSTNIG00000009685 I 0.708
RUNX3 Anolis carolinensis ENSACAG00000017855 I 0.728
RUNX3 Canis familiaris ENSCAFG00000012903 I 0.708
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.700
runx3 Danio rerio ENSDARG00000052826 I 0.708
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I 0.708
RUNX3 Felis catus ENSFCAG00000000680 I 0.708
RUNX3 Homo sapiens ENSG00000020633 D 0.708
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.708
RUNX3 Gorilla gorilla ENSGGOG00000004848 I 0.708
RUNX3 Loxodonta africana ENSLAFG00000008382 I 0.708
RUNX3 Macaca mulatta ENSMMUG00000002420 I 0.700
Runx3 Mus musculus ENSMUSG00000070691 D 0.708
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I 0.708
RUNX3 Otolemur garnettii ENSOGAG00000025633 I 0.708
RUNX3 Ochotona princeps ENSOPRG00000011273 I 0.708
runx3 Oryzias latipes ENSORLG00000017515 I 0.708
RUNX3 Pan troglodytes ENSPTRG00000000351 I 0.708
Runx3 Rattus norvegicus ENSRNOG00000054217 I 0.708
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I 0.708
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.708
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.708
RUNX3 Tursiops truncatus ENSTTRG00000009396 I 0.708
runx3 Xenopus tropicalis XB-GENE-487784 I 0.715
runx3.L Xenopus laevis XB-GENE-6487158 I 0.700
Tal_R011874 Tyto alba Tal_R011874 I 0.747
XP_002939386 Xenopus tropicalis XP_002939386 I 0.715
XP_002939387 Xenopus tropicalis XP_002939387 I 0.715
XP_002939388 Xenopus tropicalis XP_002939388 I 0.715