ENSXMAG00000006715 (Xiphophorus maculatus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSXMAG00000006715 T319519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.738 0.738
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.738 0.738
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.738 0.738
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.738 0.738
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.738 0.738
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.738 0.738
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.738 0.738
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.738 0.738
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.738 0.738
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.738 0.738
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.738 0.738
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.738 0.738
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.723 0.723
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.723 0.723
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.723 0.723
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.723 0.723
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.723 0.723
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.723 0.723
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.723 0.723
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.723 0.723
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.723 0.723
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.723 0.723
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.723 0.723
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.723 0.723
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.723 0.723
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.723 0.723
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.723 0.723
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.723 0.723
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.723 0.723
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.723 0.723
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.723 0.723
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.723 0.723
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.723 0.723
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.723 0.723
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.723 0.723
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000006725 Runt 42 172

Links

Other Runt family TFs
Other Xiphophorus maculatus TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_03785 Capronia coronata A1O1_03785 N 0.000
A1O3_06320 Capronia epimyces A1O3_06320 N 0.000
A1O5_06001 Cladophialophora psammophila A1O5_06001 N 0.000
A1O7_09417 Cladophialophora yegresii A1O7_09417 N 0.000
A1O9_05511 Exophiala aquamarina A1O9_05511 N 0.000
ANIA_06715 Aspergillus nidulans CADANIAG00007503 N 0.000
ATEG_06370 Aspergillus terreus CADATEAG00008183 N 0.000
BDDG_00964 Blastomyces dermatitidis BDDG_00964 N 0.000
CADAFLAG00000438 Aspergillus flavus CADAFLAG00000438 N 0.000
CADANGAG00005499 Aspergillus niger CADANGAG00005499 N 0.000
CADAORAG00002423 Aspergillus oryzae CADAORAG00002423 N 0.000
EDP43286.1 Malassezia globosa EDP43286.1 N 0.000
EPUS_03374 Endocarpon pusillum EPUS_03374 N 0.000
EURHEDRAFT_448117 Aspergillus ruber EURHEDRAFT_448117 N 0.000
G647_09373 Cladophialophora carrionii G647_09373 N 0.000
HCBG_01177 Histoplasma capsulatum HCBG_01177 N 0.000
HMPREF1120_09024 Exophiala dermatitidis HMPREF1120_09024 N 0.000
HMPREF1541_02649 Cyphellophora europaea HMPREF1541_02649 N 0.000
HPODL_04058 Ogataea parapolymorpha HPODL_04058 N 0.000
MELLADRAFT_50812 Melampsora laricipopulina MELLADRAFT_50812 N 0.000
NFIA_026870 Neosartorya fischeri CADNFIAG00002605 N 0.000
PAAG_00034 Paracoccidioides sp lutzii PAAG_00034 N 0.000
PABG_05070 Paracoccidioides brasiliensis PABG_05070 N 0.000
PAS_chr1-3_0098 Komagataella pastoris PAS_chr1-3_0098 N 0.000
Pc12g06750 Penicillium chrysogenum Pc12g06750 N 0.000
PCH_Pc12g06750 Penicillium rubens PCH_Pc12g06750 N 0.000
PDE_09266 Penicillium oxalicum PDE_09266 N 0.000
PDIP_54290 Penicillium digitatum PDIP_54290 N 0.000
PFL1_06760 Pseudozyma flocculosa PFL1_06760 N 0.000
PGTG_08863 Puccinia graminis PGTG_08863 N 0.000
PITC_033140 Penicillium italicum PITC_033140 N 0.000
PMAA_091540 Talaromyces marneffei PMAA_091540 N 0.000
PMAA_091540 Penicillium marneffei PMAA_091540 N 0.000
PV04_10072 Capronia semiimmersa PV04_10072 N 0.000
PV05_03112 Exophiala xenobiotica PV05_03112 N 0.000
PV06_08089 Exophiala oligosperma PV06_08089 N 0.000
PV07_09262 Cladophialophora immunda PV07_09262 N 0.000
PV08_06900 Exophiala spinifera PV08_06900 N 0.000
PV10_01675 Exophiala mesophila PV10_01675 N 0.000
PVAR5_5971 Byssochlamys spectabilis PVAR5_5971 N 0.000
SJAG_00987 Schizosaccharomyces japonicus SJAG_00987 N 0.000
SPOG_04098 Schizosaccharomyces cryophilus SPOG_04098 N 0.000
TSTA_050320 Talaromyces stipitatus TSTA_050320 N 0.000
U727_0043243011 Penicillium solitum U727_0043243011 N 0.000
UREG_06253 Uncinocarpus reesii UREG_06253 N 0.000
XP_002489438.1 Pichia pastoris XP_002489438.1 N 0.000
Z517_02357 Fonsecaea pedrosoi Z517_02357 N 0.000
Z518_07647 Rhinocladiella mackenziei Z518_07647 N 0.000
Z519_04735 Cladophialophora bantiana Z519_04735 N 0.000