SINV13356 (Solenopsis invicta)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 SINV13356 T319620_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.785 0.785
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.708 0.708
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.708 0.708
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.708 0.708
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.708 0.708
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.700 0.700
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.700 0.700
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.700 0.700
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.700 0.700
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.700 0.700
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.700 0.700
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.700 0.700
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.700 0.700
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.700 0.700
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.700 0.700
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.700 0.700
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV13356-PA Runt 17 146

Links

Other Runt family TFs
Other Solenopsis invicta TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL006160 Aedes aegypti AAEL006160 I 0.754
AAEL006167 Aedes aegypti AAEL006167 I 0.769
AAEL007040 Aedes aegypti AAEL007040 I 0.738
AALB007752 Anopheles albimanus AALB007752 I 0.775
AALB007754 Anopheles albimanus AALB007754 I 0.769
AALB009220 Anopheles albimanus AALB009220 I 0.731
AARA004356 Anopheles arabiensis AARA004356 I 0.738
AARA011472 Anopheles arabiensis AARA011472 I 0.762
AATE002063 Anopheles atroparvus AATE002063 I 0.754
AATE017340 Anopheles atroparvus AATE017340 I 0.769
ACEP16400 Atta cephalotes ACEP16400 I 0.762
ACEP16410 Atta cephalotes ACEP16410 I 0.915
ACHR004078 Anopheles christyi ACHR004078 I 0.738
ACHR006341 Anopheles christyi ACHR006341 I 0.754
ACOM031089 Anopheles coluzzii ACOM031089 I 0.762
ACUA016618 Anopheles culicifacies ACUA016618 I 0.762
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.746
ACYPI006937 Acyrthosiphon pisum ACYPI006937 I 0.708
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.731
ADIR005600 Anopheles dirus ADIR005600 I 0.762
AEPI003479 Anopheles epiroticus AEPI003479 I 0.738
AEPI010884 Anopheles epiroticus AEPI010884 I 0.762
AFAF000166 Anopheles farauti AFAF000166 I 0.762
AFUN010423 Anopheles funestus AFUN010423 I 0.762
AGAP001094 Anopheles gambiae AGAP001094 I 0.762
AGAP002506 Anopheles gambiae AGAP002506 I 0.738
AMAM016300 Anopheles maculatus AMAM016300 I 0.762
AMEC007551 Anopheles melas AMEC007551 I 0.762
AMEM004753 Anopheles merus AMEM004753 I 0.762
AMEM017856 Anopheles merus AMEM017856 I 0.738
AMIN002518 Anopheles minimus AMIN002518 I 0.738
AMIN005759 Anopheles minimus AMIN005759 I 0.762
AQUA009970 Anopheles quadriannulatus AQUA009970 I 0.762
ASIS001308 Anopheles sinensis ASIS001308 I 0.769
ASTEI07770 Anopheles stephensi ASTEI07770 I 0.762
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.754
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.738
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.792
CapteG142159 Capitella teleta CapteG142159 I 0.708
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.723
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.862
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.738
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.738
CGI_10005366 Crassostrea gigas CGI_10005366 I 0.700
CLEC011122 Cimex lectularius CLEC011122 I 0.769
Cmyd_10020845 Chelonia mydas Cmyd_10020845 I 0.700
CPIJ001309 Culex quinquefasciatus CPIJ001309 I 0.754
CpipJ_CPIJ001309 Culex pipiens CpipJ_CPIJ001309 I 0.754
DAPPUDRAFT_290557 Daphnia pulex DAPPUDRAFT_290557 I 0.700
ENSAMEG00000010102 Ailuropoda melanoleuca ENSAMEG00000010102 I 0.700
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.708
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.700
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.711
ENSAPLG00000016439 Anas platyrhynchos ENSAPLG00000016439 I 0.700
ENSCPOG00000000551 Cavia porcellus ENSCPOG00000000551 I 0.700
ENSCSAG00000000947 Chlorocebus sabaeus ENSCSAG00000000947 I 0.700
ENSFALG00000000470 Ficedula albicollis ENSFALG00000000470 I 0.700
ENSGALG00000026821 Gallus gallus ENSGALG00000026821 I 0.700
ENSGMOG00000019132 Gadus morhua ENSGMOG00000019132 I 0.700
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.700
ENSMODG00000013941 Monodelphis domestica ENSMODG00000013941 I 0.700
ENSOANG00000031074 Ornithorhynchus anatinus ENSOANG00000031074 I 0.800
ENSOARG00000006421 Ovis aries ENSOARG00000006421 I 0.700
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.700
ENSPANG00000008140 Papio anubis ENSPANG00000008140 I 0.700
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.700
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.700
ENSPSIG00000012728 Pelodiscus sinensis ENSPSIG00000012728 I 0.700
ENSPSIG00000014293 Pelodiscus sinensis ENSPSIG00000014293 I 0.728
ENSSTOG00000022471 Ictidomys tridecemlineatus ENSSTOG00000022471 I 0.700
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.700
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.754
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.731
GA25684 Drosophila pseudoobscura FBgn0247061 I 0.708
GB52718 Apis mellifera GB52718 I 0.738
GB52719 Apis mellifera GB52719 I 0.869
GB52721 Apis mellifera GB52721 I 0.715
GB52761 Apis mellifera GB52761 I 0.731
GD16951 Drosophila simulans FBgn0188530 I 0.700
GD17495 Drosophila simulans FBgn0189047 I 0.754
GE15340 Drosophila yakuba FBgn0232921 I 0.708
GE17788 Drosophila yakuba FBgn0235232 I 0.708
GE17890 Drosophila yakuba FBgn0235328 I 0.754
GF15967 Drosophila ananassae FBgn0092990 I 0.754
GF15970 Drosophila ananassae FBgn0092993 I 0.785
GF15983 Drosophila ananassae FBgn0093006 I 0.708
Gfo_R011596 Geospiza fortis Gfo_R011596 I 0.702
GG17578 Drosophila erecta FBgn0109803 I 0.708
GG18309 Drosophila erecta FBgn0110525 I 0.708
GG19691 Drosophila erecta FBgn0111893 I 0.754
GH17737 Drosophila grimshawi FBgn0125207 I 0.754
GH17740 Drosophila grimshawi FBgn0125210 I 0.785
GH17774 Drosophila grimshawi FBgn0125244 I 0.708
GI14398 Drosophila mojavensis FBgn0137150 I 0.738
GI15119 Drosophila mojavensis FBgn0137869 I 0.708
GI15491 Drosophila mojavensis FBgn0138240 I 0.785
GJ18742 Drosophila virilis FBgn0205894 I 0.738
GJ18917 Drosophila virilis FBgn0206063 I 0.708
GJ19245 Drosophila virilis FBgn0206390 I 0.754
GK19810 Drosophila willistoni FBgn0221808 I 0.754
GK19815 Drosophila willistoni FBgn0221813 I 0.785
GK20052 Drosophila willistoni FBgn0222049 I 0.708
GK25373 Drosophila willistoni FBgn0227332 I 0.746
GL15800 Drosophila persimilis FBgn0153404 I 0.754
GL15806 Drosophila persimilis FBgn0153410 I 0.785
GL15927 Drosophila persimilis FBgn0153531 I 0.708
GL16499 Drosophila persimilis FBgn0154103 I 0.731
GM22478 Drosophila sechellia FBgn0177348 I 0.708
GM22662 Drosophila sechellia FBgn0177532 I 0.708
GM23044 Drosophila sechellia FBgn0177912 I 0.754
GM23050 Drosophila sechellia FBgn0177918 I 0.785
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.738
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.723
Hsal_12321--XP_001121886.1_APIME Harpegnathos saltator Hsal_12321--XP_001121886.1_APIME I 0.777
Hsal_12322--XP_394014.2_APIME Harpegnathos saltator Hsal_12322--XP_394014.2_APIME I 0.738
ISCW004493 Ixodes scapularis ISCW004493 I 0.708
KGM_21067 Danaus plexippus KGM_21067 I 0.808
KGM_21075 Danaus plexippus KGM_21075 I 0.746
L798_10922 Zootermopsis nevadensis L798_10922 I 0.800
LCUP002659 Lucilia cuprina LCUP002659 I 0.785
LDEC006645 Leptinotarsa decemlineata LDEC006645 I 0.769
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.723
LotgiG96224 Lottia gigantea LotgiG96224 I 0.700
lz Drosophila melanogaster FBgn0002576 D 0.708
MCINX000302 Melitaea cinxia MCINX000302 I 0.731
MCINX005905 Melitaea cinxia MCINX005905 I 0.792
MCINX005906 Melitaea cinxia MCINX005906 I 0.756
MDOA009046 Musca domestica MDOA009046 I 0.777
MDOA010744 Musca domestica MDOA010744 I 0.708
MDOA011942 Musca domestica MDOA011942 I 0.700
MDOA013149 Musca domestica MDOA013149 I 0.754
MESCA003521 Megaselia scalaris MESCA003521 I 0.731
MESCA007078 Megaselia scalaris MESCA007078 I 0.730
NV10998 Nasonia vitripennis NV10998 I 0.738
NV11000 Nasonia vitripennis NV11000 I 0.731
NV17759 Nasonia vitripennis NV17759 I 0.846
NV17793 Nasonia vitripennis NV17793 I 0.708
PHUM333300 Pediculus humanus PHUM333300 I 0.738
PHUM333310 Pediculus humanus PHUM333310 I 0.777
PHUM333320 Pediculus humanus PHUM333320 I 0.746
PHUM333340 Pediculus humanus PHUM333340 I 0.769
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.833
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.754
Pvit_17193 Pogona vitticeps Pvit_17193 I 0.700
RPRC005391 Rhodnius prolixus RPRC005391 I 0.738
run Drosophila melanogaster FBgn0003300 D 0.785
run Drosophila pseudoobscura FBgn0013862 I 0.785
run Drosophila virilis FBgn0013920 I 0.785
run Drosophila simulans FBgn0016352 I 0.785
run Drosophila yakuba FBgn0084618 I 0.785
run Drosophila erecta FBgn0085118 I 0.785
RUNX1 Macaca mulatta ENSMMUG00000001649 I 0.700
RUNX3 Canis familiaris ENSCAFG00000012903 I 0.700
RUNX3 Callithrix jacchus ENSCJAG00000020815 I 0.700
runx3 Danio rerio ENSDARG00000052826 I 0.700
RUNX3 Dasypus novemcinctus ENSDNOG00000043493 I 0.700
RUNX3 Felis catus ENSFCAG00000000680 I 0.700
RUNX3 Homo sapiens ENSG00000020633 D 0.700
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.700
RUNX3 Gorilla gorilla ENSGGOG00000004848 I 0.700
RUNX3 Loxodonta africana ENSLAFG00000008382 I 0.700
RUNX3 Macaca mulatta ENSMMUG00000002420 I 0.700
Runx3 Mus musculus ENSMUSG00000070691 D 0.700
RUNX3 Oryctolagus cuniculus ENSOCUG00000017751 I 0.700
RUNX3 Otolemur garnettii ENSOGAG00000025633 I 0.700
RUNX3 Ochotona princeps ENSOPRG00000011273 I 0.700
runx3 Oryzias latipes ENSORLG00000017515 I 0.700
RUNX3 Pan troglodytes ENSPTRG00000000351 I 0.700
Runx3 Rattus norvegicus ENSRNOG00000054217 I 0.700
RUNX3 Taeniopygia guttata ENSTGUG00000001130 I 0.700
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.700
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.700
RUNX3 Tursiops truncatus ENSTTRG00000009396 I 0.700
runx3 Xenopus tropicalis XB-GENE-487784 I 0.700
runx3.L Xenopus laevis XB-GENE-6487158 I 0.708
RunxA Drosophila melanogaster FBgn0083981 I 0.708
RunxB Drosophila melanogaster FBgn0259162 I 0.754
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.700
SINV13317 Solenopsis invicta SINV13317 I 0.723
SINV13363 Solenopsis invicta SINV13363 I 0.738
TC005566 Tribolium castaneum TC005566 I 0.746
TC005796 Tribolium castaneum TC005796 I 0.746
TC006536 Tribolium castaneum TC006536 I 0.746
TC006542 Tribolium castaneum TC006542 I 0.792
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.731
TriadG25179 Trichoplax adhaerens TriadG25179 I 0.700
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.731