CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PXEA_0003260001
(
Protopolystoma xenopodis
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
PXEA_0003260001
T319839_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0003260001-mRNA-1
Runt
11
132
LRRALREHTGDLVVTSSPHLLCSSLPKHWRSNKSLPTPFRVVSLKPIPNGTKVALLAGNEERPCAELKNAVAVMHNQEARFSDLRFLGRSGRGSLESKEIATETVSAETVLCLSQSAALQVE
Links
Other
Runt
family TFs
Other
Protopolystoma xenopodis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_01367
Capronia coronata
A1O1_01367
N
0.000
A1O5_00510
Cladophialophora psammophila
A1O5_00510
N
0.000
A1O7_01450
Cladophialophora yegresii
A1O7_01450
N
0.000
AFUA_4G03670
Aspergillus fumigatus
CADAFUAG00001341
N
0.000
ANIA_05775
Aspergillus nidulans
CADANIAG00003279
N
0.000
BAUCODRAFT_39585
Baudoinia compniacensis
BAUCODRAFT_39585
N
0.000
Bcin15g02830
Botrytis cinerea
Bcin15g02830
N
0.000
DOTSEDRAFT_75032
Dothistroma septosporum
DOTSEDRAFT_75032
N
0.000
MELLADRAFT_114391
Melampsora laricipopulina
MELLADRAFT_114391
N
0.000
NFIA_029740
Neosartorya fischeri
CADNFIAG00002822
N
0.000
OIDMADRAFT_117559
Oidiodendron maius
OIDMADRAFT_117559
N
0.000
PAAG_00881
Paracoccidioides sp lutzii
PAAG_00881
N
0.000
PABG_01362
Paracoccidioides brasiliensis
PABG_01362
N
0.000
Pc14g01370
Penicillium chrysogenum
Pc14g01370
N
0.000
Pc21g06560
Penicillium chrysogenum
Pc21g06560
N
0.000
PCH_Pc14g01370
Penicillium rubens
PCH_Pc14g01370
N
0.000
PCH_Pc21g06560
Penicillium rubens
PCH_Pc21g06560
N
0.000
PDE_02517
Penicillium oxalicum
PDE_02517
N
0.000
PGTG_11917
Puccinia graminis
PGTG_11917
N
0.000
PV04_00511
Capronia semiimmersa
PV04_00511
N
0.000
PV05_10000
Exophiala xenobiotica
PV05_10000
N
0.000
PV06_06048
Exophiala oligosperma
PV06_06048
N
0.000
PV08_04909
Exophiala spinifera
PV08_04909
N
0.000
PV08_11848
Exophiala spinifera
PV08_11848
N
0.000
PV08_12089
Exophiala spinifera
PV08_12089
N
0.000
PV09_07855
Verruconis gallopava
PV09_07855
N
0.000
PV10_03009
Exophiala mesophila
PV10_03009
N
0.000
PV11_10054
Exophiala sideris
PV11_10054
N
0.000
Z518_05059
Rhinocladiella mackenziei
Z518_05059
N
0.000
Z519_00518
Cladophialophora bantiana
Z519_00518
N
0.000