Bo6g120380 (Brassica oleracea)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bo6g120380 T319929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.959 0.959
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g120380.1 RWP-RK 543 591

Links

Other RWP-RK family TFs
Other Brassica oleracea TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N 0.000
LPERR01G14420 Leersia perrieri LPERR01G14420 N 0.000
OBART01G16010 Oryza barthii OBART01G16010 N 0.000
OGLUM01G18710 Oryza glumaepatula OGLUM01G18710 N 0.000
OMERI01G14750 Oryza meridionalis OMERI01G14750 N 0.000
ONIVA01G18160 Oryza nivara ONIVA01G18160 N 0.000
OPUNC01G16830 Oryza punctata OPUNC01G16830 N 0.000
ORGLA01G0399300 Oryza glaberrima ORGLA01G0399300 N 0.000
ORUFI01G17760 Oryza rufipogon ORUFI01G17760 N 0.000