Bra015758 (Brassica rapa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Bra015758 T319957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.959 0.959
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra015758.1-P RWP-RK 537 585

Links

Other RWP-RK family TFs
Other Brassica rapa TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_05413 Capronia coronata A1O1_05413 N
A1O3_09265 Capronia epimyces A1O3_09265 N
A1O5_09317 Cladophialophora psammophila A1O5_09317 I
A1O7_07588 Cladophialophora yegresii A1O7_07588 I
A1O7_09309 Cladophialophora yegresii A1O7_09309 I
A1O9_11821 Exophiala aquamarina A1O9_11821 N
ANIA_01518 Aspergillus nidulans CADANIAG00008146 D
AUEXF2481DRAFT_47944 Aureobasidium subglaciale AUEXF2481DRAFT_47944 N
AUEXF2481DRAFT_79059 Aureobasidium subglaciale AUEXF2481DRAFT_79059 N
BAUCODRAFT_53895 Baudoinia compniacensis BAUCODRAFT_53895 I
CADANGAG00013211 Aspergillus niger CADANGAG00013211 N
CIMG_04295 Coccidioides immitis CIMG_04295 N
CPC735_074200 Coccidioides posadasii CPC735_074200 N
DOTSEDRAFT_144285 Dothistroma septosporum DOTSEDRAFT_144285 N
FGRRES_07198 Fusarium graminearum FGRRES_07198 D
FOXG_01595 Fusarium oxysporum FOXG_01595 I
FPSE_03183 Fusarium pseudograminearum FPSE_03183 I
FVEG_07955 Fusarium verticillioides FVEG_07955 I
G647_02495 Cladophialophora carrionii G647_02495 I
gw1.1.1345.1 Mycosphaerella fijiensis gw1.1.1345.1 N
HCBG_01887 Histoplasma capsulatum HCBG_01887 I
HMPREF1120_07579 Exophiala dermatitidis HMPREF1120_07579 I
HMPREF1541_10476 Cyphellophora europaea HMPREF1541_10476 N
M438DRAFT_272404 Aureobasidium pullulans M438DRAFT_272404 I
MYCFIDRAFT_10996 Pseudocercospora fijiensis MYCFIDRAFT_10996 N
NCU09804 Neurospora crassa NCU09804 N
OIDMADRAFT_127085 Oidiodendron maius OIDMADRAFT_127085 I
PDE_06483 Penicillium oxalicum PDE_06483 N
PMAA_009490 Penicillium marneffei PMAA_009490 N
PMAA_009490 Talaromyces marneffei PMAA_009490 N
PV04_08060 Capronia semiimmersa PV04_08060 I
PV05_05046 Exophiala xenobiotica PV05_05046 I
PV06_00923 Exophiala oligosperma PV06_00923 I
PV07_11766 Cladophialophora immunda PV07_11766 I
PV08_00614 Exophiala spinifera PV08_00614 I
PV10_06301 Exophiala mesophila PV10_06301 N
PV11_00701 Exophiala sideris PV11_00701 N
PVAR5_2835 Byssochlamys spectabilis PVAR5_2835 N
SBOR_8252 Sclerotinia borealis SBOR_8252 I
TSTA_058980 Talaromyces stipitatus TSTA_058980 N
W97_01247 Coniosporium apollinis W97_01247 N
Z517_03173 Fonsecaea pedrosoi Z517_03173 I
Z518_07309 Rhinocladiella mackenziei Z518_07309 N
Z518_09326 Rhinocladiella mackenziei Z518_09326 I
Z519_01249 Cladophialophora bantiana Z519_01249 I