CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr8G04280_001
(
Musa acuminata
)
RWP-RK
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02042 (RWP-RK)
IPR003035
GSMUA_Achr8G04280_001
T320126_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NLP7
M07251_2.00
Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW
Dap-seq
OMalley et al.(2016)
NLP7_col_a
0.878
0.878
NLP4
M07248_2.00
Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN
Dap-seq
OMalley et al.(2016)
AtNLP4_col_b
0.755
0.755
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr8P04280_001
RWP-RK
434
482
TISLELLQQYFSGNLKDAAKSLGVCPTTMKRICRHHGISRWPSRKINKV
Links
Other
RWP-RK
family TFs
Other
Musa acuminata
TFs
415 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_014390
Acremonium chrysogenum
ACRE_014390
N
0.000
BBA_01626
Beauveria bassiana
BBA_01626
N
0.000
CCM_00106
Cordyceps militaris
CCM_00106
N
0.000
CFIO01_08383
Colletotrichum fioriniae
CFIO01_08383
N
0.000
CGGC5_8876
Colletotrichum gloeosporioides
CGGC5_8876
N
0.000
CH063_10454
Colletotrichum higginsianum
CH063_10454
N
0.000
Cob_13289
Colletotrichum orbiculare
Cob_13289
N
0.000
CPUR_01633
Claviceps purpurea
CPUR_01633
N
0.000
CSUB01_06780
Colletotrichum sublineola
CSUB01_06780
N
0.000
e_gw1.4.942.1
Cryphonectria parasitica
e_gw1.4.942.1
N
0.000
F503_04232
Ophiostoma piceae uamh
F503_04232
N
0.000
FFUJ_00487
Fusarium fujikuroi
FFUJ_00487
N
0.000
fgenesh1_pg.sca_1_chr1_3_0000989
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000989
N
0.000
FOXG_01081
Fusarium oxysporum
FOXG_01081
N
0.000
FPSE_01269
Fusarium pseudograminearum
FPSE_01269
N
0.000
FVEG_00433
Fusarium verticillioides
FVEG_00433
N
0.000
GGTG_07801
Gaeumannomyces graminis
GGTG_07801
N
0.000
GLRG_00605
Colletotrichum graminicola
GLRG_00605
N
0.000
HMPREF1624_07505
Sporothrix schenckii
HMPREF1624_07505
N
0.000
MAC_05157
Metarhizium acridum
MAC_05157
N
0.000
MAJ_06003
Metarhizium majus
MAJ_06003
N
0.000
MAM_06097
Metarhizium album
MAM_06097
N
0.000
MANI_025150
Metarhizium anisopliae
MANI_025150
N
0.000
MBR_00240
Metarhizium brunneum
MBR_00240
N
0.000
MGU_08133
Metarhizium guizhouense
MGU_08133
N
0.000
NechaG75378
Fusarium solani
NechaG75378
N
0.000
OCS_04926
Ophiocordyceps sinensis
OCS_04926
N
0.000
PFICI_06254
Pestalotiopsis fici
PFICI_06254
N
0.000
SAPIO_CDS5481
Scedosporium apiospermum
SAPIO_CDS5481
N
0.000
SPBR_07989
Sporothrix brasiliensis
SPBR_07989
N
0.000
TRIATDRAFT_9815
Trichoderma atroviride
TRIATDRAFT_9815
N
0.000
TRIREDRAFT_43269
Trichoderma reesei
TRIREDRAFT_43269
N
0.000
TRIVIDRAFT_19860
Trichoderma virens
TRIVIDRAFT_19860
N
0.000
UCRPA7_6169
Togninia minima
UCRPA7_6169
N
0.000
VDBG_07369
Verticillium alfalfae
VDBG_07369
N
0.000
VDBG_07369
Verticillium albo atrum
VDBG_07369
N
0.000
VHEMI05051
Torrubiella hemipterigena
VHEMI05051
N
0.000
X797_002594
Metarhizium robertsii
X797_002594
N
0.000