OB02G12720 (Oryza brachyantha)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OB02G12720 T320552_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.796 0.796
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB02G12720.1 RWP-RK 298 346

Links

Other RWP-RK family TFs
Other Oryza brachyantha TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0001241401 Angiostrongylus costaricensis ACOC_0001241401 I 0.000
ALUE_0000326401 Ascaris lumbricoides ALUE_0000326401 I 0.000
ANCCAN_03294 Ancylostoma caninum ANCCAN_03294 I 0.000
ANCCEY_09166 Ancylostoma ceylanicum ANCCEY_09166 I 0.000
ASIM_0000214101 Anisakis simplex ASIM_0000214101 I 0.000
ASIM_0001335601 Anisakis simplex ASIM_0001335601 I 0.000
ASU_05094 Ascaris suum ASU_05094 I 0.000
BGLB003270 Biomphalaria glabrata BGLB003270 I 0.000
Bm7588 Brugia malayi Bm7588 I 0.000
BTMF_0000617301 Brugia timori BTMF_0000617301 I 0.000
CBG19808 Caenorhabditis briggsae CBG19808 I 0.000
CBN32559 Caenorhabditis brenneri CBN32559 I 0.000
ces-2 Caenorhabditis elegans WBGene00000469 D 0.000
CJA10655 Caenorhabditis japonica CJA10655 I 0.000
DME_0000215901 Dracunculus medinensis DME_0000215901 I 0.000
EEL_0000071901 Elaeophora elaphi EEL_0000071901 I 0.000
EVEC_0000550601 Enterobius vermicularis EVEC_0000550601 I 0.000
GPUH_0000579801 Gongylonema pulchrum GPUH_0000579801 I 0.000
HCOI01537900 Haemonchus contortus HCOI01537900 I 0.000
HPLM_0000755401 Haemonchus placei HPLM_0000755401 I 0.000
L596_g3194 Steinernema carpocapsae L596_g3194 I 0.000
L889_g9945 Steinernema feltiae L889_g9945 I 0.000
L893_g26459 Steinernema glaseri L893_g26459 I 0.000
L898_g30246 Steinernema monticolum L898_g30246 I 0.000
LOAG_04491 Loa loa LOAG_04491 I 0.000
nAv.1.0.1.g06570 Acanthocheilonema viteae nAv.1.0.1.g06570 I 0.000
nDi.2.2.2.g01315 Dirofilaria immitis nDi.2.2.2.g01315 I 0.000
nDi.2.2.2.g10294 Dirofilaria immitis nDi.2.2.2.g10294 I 0.000
nLs.2.1.2.g06633 Litomosoides sigmodontis nLs.2.1.2.g06633 I 0.000
nOo.2.0.1.g09202 Onchocerca ochengi nOo.2.0.1.g09202 I 0.000
OFLC_0001455401 Onchocerca flexuosa OFLC_0001455401 I 0.000
PEQ_0001019701 Parascaris equorum PEQ_0001019701 I 0.000
PTRK_0001316500 Parastrongyloides trichosuri PTRK_0001316500 I 0.000
SMUV_0001027601 Syphacia muris SMUV_0001027601 I 0.000
SPAL_0001536200 Strongyloides papillosus SPAL_0001536200 I 0.000
SSTP_0000025200 Strongyloides stercoralis SSTP_0000025200 I 0.000
SVE_0152400 Strongyloides venezuelensis SVE_0152400 I 0.000
SVUK_0000058801 Strongylus vulgaris SVUK_0000058801 I 0.000
TCNE_0000328801 Toxocara canis TCNE_0000328801 I 0.000
WBGene00237430 Onchocerca volvulus WBGene00237430 I 0.000
WUBG_01294 Wuchereria bancrofti WUBG_01294 I 0.000