OMERI11G08010 (Oryza meridionalis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OMERI11G08010 T320605_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.703 0.703
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI11G08010.10 RWP-RK 224 260
OMERI11G08010.11 RWP-RK 641 689
OMERI11G08010.1 RWP-RK 563 599
OMERI11G08010.2 RWP-RK 596 644
OMERI11G08010.3 RWP-RK 703 751
OMERI11G08010.5 RWP-RK 641 689
OMERI11G08010.6 RWP-RK 531 579
OMERI11G08010.7 RWP-RK 581 629
OMERI11G08010.8 RWP-RK 534 582
OMERI11G08010.9 RWP-RK 638 686

Links

Other RWP-RK family TFs
Other Oryza meridionalis TFs

422 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010557 Aedes aegypti AAEL010557 N 0.000
AALB006632 Anopheles albimanus AALB006632 N 0.000
AARA001098 Anopheles arabiensis AARA001098 N 0.000
ACOM036058 Anopheles coluzzii ACOM036058 N 0.000
ADIR000986 Anopheles dirus ADIR000986 N 0.000
AEPI007593 Anopheles epiroticus AEPI007593 N 0.000
AFAF009887 Anopheles farauti AFAF009887 N 0.000
AFUN011561 Anopheles funestus AFUN011561 N 0.000
AGAP013406 Anopheles gambiae AGAP013406 N 0.000
AMAM003662 Anopheles maculatus AMAM003662 N 0.000
AMEC004233 Anopheles melas AMEC004233 N 0.000
AMEM007871 Anopheles merus AMEM007871 N 0.000
AMIN002143 Anopheles minimus AMIN002143 N 0.000
AQUA008325 Anopheles quadriannulatus AQUA008325 N 0.000
ASIS007000 Anopheles sinensis ASIS007000 N 0.000
ASTEI06217 Anopheles stephensi ASTEI06217 N 0.000
CPIJ011242 Culex quinquefasciatus CPIJ011242 N 0.000
CPIJ015080 Culex quinquefasciatus CPIJ015080 N 0.000
CpipJ_CPIJ011242 Culex pipiens CpipJ_CPIJ011242 N 0.000
CpipJ_CPIJ015080 Culex pipiens CpipJ_CPIJ015080 N 0.000
DAPPUDRAFT_227979 Daphnia pulex DAPPUDRAFT_227979 N 0.000
ENSMODG00000027678 Monodelphis domestica ENSMODG00000027678 N 0.000
ENSSHAG00000016082 Sarcophilus harrisii ENSSHAG00000016082 N 0.000
L798_09207 Zootermopsis nevadensis L798_09207 N 0.000
LotgiG174714 Lottia gigantea LotgiG174714 N 0.000
Sakowv30001353m.g Saccoglossus kowalevskii Sakowv30001353m.g N 0.000
SMAR009752 Strigamia maritima SMAR009752 N 0.000
SPU_016650 Strongylocentrotus purpuratus SPU_016650 N 0.000