POPTR_0003s14300 (Populus trichocarpa)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 POPTR_0003s14300 T320739_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.837 0.837
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s14300.1 RWP-RK 577 625

Links

Other RWP-RK family TFs
Other Populus trichocarpa TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011202 Aedes aegypti AAEL011202 N
AALB010881 Anopheles albimanus AALB010881 N
AARA010375 Anopheles arabiensis AARA010375 N
AATE014395 Anopheles atroparvus AATE014395 N
ACOM033597 Anopheles coluzzii ACOM033597 N
ACUA019091 Anopheles culicifacies ACUA019091 N
ADAC004518 Anopheles darlingi ADAC004518 N
ADIR000952 Anopheles dirus ADIR000952 N
AEPI010450 Anopheles epiroticus AEPI010450 N
AFAF006398 Anopheles farauti AFAF006398 N
AFUN011454 Anopheles funestus AFUN011454 N
AGAP000682 Anopheles gambiae AGAP000682 N
AMAM021559 Anopheles maculatus AMAM021559 N
AMEC004142 Anopheles melas AMEC004142 N
AMEM008262 Anopheles merus AMEM008262 N
AMIN005859 Anopheles minimus AMIN005859 N
AQUA005761 Anopheles quadriannulatus AQUA005761 N
ASIS018654 Anopheles sinensis ASIS018654 N
ASTEI01161 Anopheles stephensi ASTEI01161 N
CpipJ_CPIJ009807 Culex pipiens CpipJ_CPIJ009807 N
NV16488 Nasonia vitripennis NV16488 N
PPAI009297 Phlebotomus papatasi PPAI009297 N