SELMODRAFT_51069 (Selaginella moellendorffii)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 SELMODRAFT_51069 T320798_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.776 0.776
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ24209 RWP-RK 389 437

Links

Other RWP-RK family TFs
Other Selaginella moellendorffii TFs

363 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_08043 Cicer arietinum Ca_08043 I 0.000
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.000
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.000
GRMZM2G095239 Zea mays GRMZM2G095239 N 0.000
GRMZM2G163291 Zea mays GRMZM2G163291 N 0.000
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I 0.000
mgf000125m Mimulus guttatus mgf000125m I 0.000
mgf004823m Mimulus guttatus mgf004823m I 0.000
mgf010975m Mimulus guttatus mgf010975m I 0.000
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.000
MTR_2g031870 Medicago truncatula MTR_2g031870 I 0.000
MTR_8g494240 Medicago truncatula MTR_8g494240 I 0.000
Pavir.Eb00490 Panicum virgatum Pavir.Eb00490 N 0.000
Pavir.Ia01166 Panicum virgatum Pavir.Ia01166 N 0.000
Pavir.Ib04118 Panicum virgatum Pavir.Ib04118 N 0.000
Pavir.J13527 Panicum virgatum Pavir.J13527 N 0.000
Pavir.J17249 Panicum virgatum Pavir.J17249 N 0.000
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.000
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.000
Sb01g013670 Sorghum bicolor Sb01g013670 N 0.000
Sb03g005080 Sorghum bicolor Sb03g005080 N 0.000
Si002375m.g Setaria italica Si002375m.g N 0.000
Si036471m.g Setaria italica Si036471m.g N 0.000
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.000
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.000
Traes_5AL_1FB74A6E1 Triticum aestivum Traes_5AL_1FB74A6E1 N 0.000
Traes_5BL_692FEF87A Triticum aestivum Traes_5BL_692FEF87A N 0.000
Traes_5DL_1C6A8C773 Triticum aestivum Traes_5DL_1C6A8C773 N 0.000
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.000
TRIUR3_26840 Triticum urartu TRIUR3_26840 N 0.000
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.000
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.000